Halobacterium salinarum NRC-1: VNG_0680G
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Entry
VNG_0680G CDS
T00038
Symbol
fdfT
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal00100
Steroid biosynthesis
hal00909
Sesquiterpenoid and triterpenoid biosynthesis
hal01100
Metabolic pathways
hal01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
VNG_0680G (fdfT)
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
VNG_0680G (fdfT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hal01006
]
VNG_0680G (fdfT)
Enzymes [BR:
hal01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
VNG_0680G (fdfT)
Prenyltransferases [BR:
hal01006
]
Terpene biosynthesis
Squalene/phytoene synthase
VNG_0680G (fdfT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF7108
Motif
Other DBs
NCBI-ProteinID:
AAG19173
UniProt:
Q9HRI5
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All DBs
Position
516984..518156
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AA seq
390 aa
AA seq
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MLCRSALYCWHPGTPSRGAMIAVGDGSTPQPLLYSPTLARPRVMDGRQSHQPTASDREWC
HSAVQDVSRTFALTIDALEEPMATRICVGYLLCRVADTVEDATAMPPTEQAQLLETYDAA
LDPDCGTTVAEFQAAVGDHVPSEPNADWRVVANTTRVVSAFESLDDAAKAAIRPTVREMA
TGMASFVQRYADAGGLRIQSPTELEEYCWYVAGTVGELVTELLARDAPSDAAAAMRENAR
SFALLLQLVNVAKDVRPDYEEENNVYLPQEWLDDHDLAPEDVADPEHAGRVASVVERVTD
RARGYVADAQRWLEVMPTSQGNTLAAWAVPFLLAVGTMRELGNRPADVVREGDVKVDREE
VHAVIGLVADDFDRSAIDSVRERIATESLS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtcggtctgccctttactgttggcatcccggaaccccatcgcggggcgcgatg
atcgcagtgggcgacgggtcgacgccccaacctcttttgtattcccccaccctagcccga
ccacgagtgatggacggccgtcagtcccaccagccgaccgcgtcggaccgcgagtggtgc
cacagcgcggtacaggacgtttcacgtacgtttgcgctcaccatcgacgccctcgaagag
ccgatggcgacgcgcatctgcgttggctacctcctgtgccgggttgccgacaccgtcgag
gacgccaccgcgatgccgcccaccgaacaagcacagctcttggagacgtatgacgccgcg
ctcgatcccgactgcgggacgaccgtcgcggagttccaggccgccgtcggcgaccacgtc
cccagcgagccgaacgccgattggcgcgtcgtcgccaacaccacccgcgtcgtctccgcg
ttcgagtccctggacgacgccgccaaggccgcgatccggccgacggtccgggagatggcc
accgggatggcgtcgttcgtacagcggtacgccgacgccggcgggctccgcatccaatca
ccaaccgagctcgaagagtactgctggtacgtcgccggcaccgtcggcgaactcgtcacg
gagctgctggcccgcgacgcgcccagcgacgccgccgccgccatgcgcgagaacgcgcgg
tcgttcgcgttgctgttgcagctcgtgaacgtcgccaaagacgtccgcccggactacgag
gaggagaacaacgtctacctgccacaggagtggctcgacgaccacgacctcgccccggaa
gacgtcgccgaccccgaacacgcgggccgcgtggcctccgtcgtcgagcgcgtcaccgac
cgcgcccgcggctacgtcgccgacgcccagcgctggcttgaggtcatgccgaccagccag
ggcaacacgctcgccgcgtgggcggtgccgttcctgcttgcggtcggcacgatgcgggag
ctcgggaaccggcccgccgacgtcgtccgcgagggggacgtgaaagtcgaccgcgaggaa
gtgcacgccgtcatcggcctggtcgccgacgatttcgaccgcagcgccatcgacagcgtg
cgcgaacggatcgcgaccgagtcgctgtcctga
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