Halobacterium salinarum NRC-1: VNG_1335G
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Entry
VNG_1335G CDS
T00038
Symbol
phr2
Name
(GenBank) photolyase/cryptochrome
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_1335G (phr2)
Enzymes [BR:
hal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VNG_1335G (phr2)
DNA repair and recombination proteins [BR:
hal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VNG_1335G (phr2)
Prokaryotic type
VNG_1335G (phr2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAG19671
UniProt:
Q9HQ46
LinkDB
All DBs
Position
complement(994265..995734)
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AA seq
489 aa
AA seq
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MPAAQPPGMQLFWHRRDLRTTDNRGLAAAAPGVTAVDGGHDQGPVAAVFCFDDEVLAHAA
PPRVAFMLDALAALRERYRDLGSDLIVRHGDPAAVLPAVANDLDATRVVWNHDYSGLATD
RDAGVRDALDAAGVAHAQFHDAVHHRPGEIRTNAGDPYSVYTYFWRKWQDREKNPPAPEP
EPADLAADTALADTSPLPSVQELGFAEPEAAVPDAGTAAARSLLDAFRESGDIYRYEDRR
DYPHEEPTSRLSPHLKFGTIGIRTVYEAARAAKSDADTDDERENVAAFIGQLAWREFYAQ
VLYFNQNVVSENFKAYEHPIEWRDDPAALQAWKDGETGYPIVDAGMRQLRAEAYMHNRVR
MIVAAFLTKDLLVDWRAGYDWFREKLADHDTANDNGGWQWAASTGTDAQPYFRVFNPMTQ
GERYDPDADYITEFVPELRDVPADAIHSWHELSLSERRRHAPEYPDPIVDHSQRREDAIA
MFERARGDE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgcccaaccccccggcatgcaactgttctggcaccgacgggacctccgcacc
acggacaaccgcggcctcgcagcggccgctccgggcgtgacagcggtcgacggcggccac
gaccagggccctgtcgcggcggtgttctgcttcgacgacgaggtgttggctcacgccgcc
ccgccccgggtcgcgttcatgctggacgcgctggccgccctccgggagcgctaccgcgac
ctcggcagcgacctcattgtccgccacggcgaccccgctgcggtgctcccggcggtcgcc
aacgatctcgacgccacccgggtcgtctggaaccacgactactcggggctggccaccgac
cgcgacgcgggcgtgcgcgacgccctcgacgcggcgggcgtcgcacacgcccagttccac
gacgccgtccaccaccggccgggcgagatccgcacgaacgcgggcgacccgtactcggtg
tacacgtacttctggcggaagtggcaggaccgcgagaagaacccgccggccccggagcca
gagcccgcggatctcgcggccgacaccgcgctcgcggacaccagcccgctgccgtccgtc
caggagctcggcttcgcggagccggaggcggcggtccccgacgccggaaccgcggcggcg
cgatcgctgctcgatgccttccgcgagtccggcgacatctaccgctacgaggaccgccgc
gattacccccacgaggaacccacgtcgcggctctccccgcacctgaagttcggcacgatc
gggatccgaacggtctacgaggccgcacgcgcggcgaaatccgacgccgacaccgacgac
gaacgcgagaacgtcgcggcgttcatcggccagctcgcgtggcgggagttctacgcacaa
gtcctgtatttcaaccagaacgtcgtctcggagaacttcaaagcgtacgagcaccccatc
gagtggcgcgacgaccccgcggcgctgcaggcctggaaggacggcgaaaccggctatccg
atcgtggacgccggcatgcgccagctccgcgcggaagcgtacatgcacaaccgcgtgcgg
atgatcgtcgccgccttcctcacgaaagacctcctggtggactggcgggcgggctacgac
tggttccgggagaagctcgcggaccacgacaccgccaacgacaacggcggctggcagtgg
gccgcctccacgggcaccgacgcccagccgtacttccgggtgttcaacccgatgacccag
ggggagcgctacgaccccgacgccgactacatcaccgagttcgtccccgaactccgggac
gtgcccgcggacgcgatccacagctggcacgagctgtcgctgtccgagcgccgccgacac
gccccggagtatccggaccccatcgtggaccacagccagcgccgcgaggacgcgatcgcg
atgttcgagcgtgcgcgcggcgacgagtga
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