Halobacterium salinarum NRC-1: VNG_1660G
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Entry
VNG_1660G CDS
T00038
Symbol
sop1
Name
(GenBank) sensory rhodopsin I
KO
K04643
sensory rhodopsin
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hal04030
]
VNG_1660G (sop1)
G protein-coupled receptors [BR:
hal04030
]
Others
Others
Bacterial rhodopsin
VNG_1660G (sop1)
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhodopsin
Motif
Other DBs
NCBI-ProteinID:
AAG19914
UniProt:
P0DMH8
A0A510N8U9
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All DBs
Position
1238694..1239413
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AA seq
239 aa
AA seq
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MDAVATAYLGGAVALIVGVAFVWLLYRSLDGSPHQSALAPLAIIPVFAGLSYVGMAYDIG
TVIVNGNQIVGLRYIDWLVTTPILVGYVGYAAGASRRSIIGVMVADALMIAVGAGAVVTD
GTLKWALFGVSSIFHLSLFAYLYVIFPRVVPDVPEQIGLFNLLKNHIGLLWLAYPLVWLF
GPAGIGEATAAGVALTYVFLDVLAKVPYVYFFYARRRVFMHSESPPAPEQATVEATAAD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgcaaccgcctacctcggcggcgcggtcgcgctcatcgtcggtgtggcg
ttcgtctggttgctgtaccggtcgttggatggctccccgcatcagtcggcgctcgcgccg
ctggccatcattcccgtgttcgcgggcctgtcctacgtggggatggcgtacgacatcgga
acggtgatcgtaaacgggaaccagatcgtcgggctgcggtacatcgactggctcgtgacg
acgccgatcctcgtggggtacgtcggctacgccgcgggggcgtcccgtcgcagcatcatc
ggtgtgatggtggcggacgcgctcatgatcgcggtgggcgcgggggcggtggtgactgac
ggcacgctcaagtgggcgctgttcggcgtgtcgtcgatcttccacctgtcgctgttcgcg
tacctgtacgtgatctttccgcgggtcgtgcccgacgtgcccgagcagatcgggctgttc
aacctgctgaaaaaccacatcgggctgctgtggttggcgtacccgctggtgtggctgttc
ggcccggccggcatcggggaggcaacggctgccggcgtcgcgctcacgtacgtgttcttg
gacgtgctcgcgaaggtgccgtacgtgtatttcttctacgcgcggcgtcgcgtgttcatg
cactcggagtcgccgccggctcccgagcaggcgaccgtcgaggcgacggcggcggactga
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