KEGG   Halobacterium salinarum NRC-1: VNG_1729G
Entry
VNG_1729G         CDS       T00038                                 
Symbol
sus
Name
(GenBank) tRNA-pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
hal  Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:hal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hal03016]
    VNG_1729G (sus)
Enzymes [BR:hal01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     VNG_1729G (sus)
Transfer RNA biogenesis [BR:hal03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VNG_1729G (sus)
 Prokaryotic type
    VNG_1729G (sus)
SSDB
Motif
Pfam: TruB_N TruB_C_2 DKCLD Pus10_C PUA DUF7344
Other DBs
NCBI-ProteinID: AAG19966
UniProt: Q9HPA4 A0A510N7I3
LinkDB
Position
1278271..1279176
AA seq 301 aa
MGIRPPPGERSPAAVLSFGVVNLDKPPGPSAHQVSAWIRDLVGVEKAAHAGTLDPKVTGC
LPVLTGTATRIAPALLEGFKEYVAVLELHDDPPRILPDVIEAFTGEIYQKPPKKSAVARR
LRTRTVYDLDVLDVDGRQVLLRIRCESGTYIRKLCHDIGRALGTNAHMGHLRRSATTPFD
DTDLVTLHDLADAVAWLRDTDDTEPPDAPADALRAAVQPAERALTHLPRLTIADSAAHEV
ATGAPVYAPGVIDTTALPTPPADGALVACYTAGGTAVCLGRLVGDPDADAGVVVALERVL
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atggggattcgaccgccacccggcgagcgcagcccggcggcagtgctgtcgtttggcgtc
gtgaacctggacaagccaccggggccgtcggcccaccaggtgtcggcgtggattcgagac
ctcgtgggcgtggagaaggccgcacacgccggcacgctcgatccgaaggtcacgggctgt
ctgcccgtgttgaccgggaccgcgacccggatcgcacccgcgctcctggaggggttcaag
gagtacgtcgccgtcctggagctgcacgacgacccgccgcgcatcctcccggacgtgatc
gaggcgttcaccggcgagatctaccagaagccgccgaagaaatccgcggtcgcgcgccgc
ctgcgcacccgcacggtctacgacctcgacgtgctcgacgtggacggccgccaggtcctg
ctccggatccggtgtgagtcgggcacgtacatccggaagctctgccacgacatcggccgc
gcgctcggcacgaacgcccacatggggcatctgcgccgcagcgccaccacgccgttcgac
gacaccgacctcgtcacgctgcacgacctcgcggacgcggtggcgtggctgcgcgacacc
gacgacaccgagccgccggacgcacccgcggacgcgctgcgcgcagcggtccagcccgcc
gagcgcgcgctcacgcacctgccgcggctcaccatcgccgactcggcagcccacgaggtc
gccacgggtgcgccggtgtacgcgccgggcgtcatcgacaccacggccctgccgacaccg
ccggcggatggggcgctggtggcgtgttacaccgcaggcgggacggcggtctgcctcggt
cggctggtcggcgatccggacgcggacgccggcgtggtcgttgccctcgaacgcgtgctc
gtgtag

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