Halobacterium salinarum NRC-1: VNG_1754G
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Entry
VNG_1754G CDS
T00038
Symbol
phr1
Name
(GenBank) photolyase/cryptochrome
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_1754G (phr1)
Enzymes [BR:
hal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VNG_1754G (phr1)
DNA repair and recombination proteins [BR:
hal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VNG_1754G (phr1)
Prokaryotic type
VNG_1754G (phr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAG19981
UniProt:
Q9HP89
LinkDB
All DBs
Position
complement(1293457..1294845)
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AA seq
462 aa
AA seq
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MHLYWHQRDLRVPDNRGLHAATDGDTVVPVYVFDDTVLSQVGRPKRAFLAAGVRALRAAY
RERGSDLLVREGDAESVLPALADEFDADTVFHAAHYDAARRNRRTRVADALAAAGVDTAG
HVDHTLVDPATLDDAYPSHSQFYDDWQQAPKPDPVPAPDADALADVHDDHTLSVPAPEPP
LPDAGHAAATDRLAAFLDDGIASYNDTRDDLAAAVDAPASAVSRLSPYLAAGNIGVREVW
AAVADAYDDATGNAARNIGKYRYELSWREQNYHLLYHTPRLQTENYVSFDAPIAWQNSDD
HFEAWTRGETGYPLVDAGMRQLRAEGYVHNRPRQVVASFLTKHLLVDWRRGERHFADRLV
DYDPANNAANWQWTASTGTDTVAVRIFDPVSQMAKYDSDAAFVTEYVPELRGVDPETIVD
WPTLRHSQRERLAPDYHHPIVDRDHAYERAQRVFEAALDGDA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtactggcaccaacgcgacctccgcgttcccgacaaccgcggcctccacgcc
gccaccgacggcgacaccgtcgtgcccgtctacgtcttcgacgacaccgtgctctcccag
gtgggccgccccaagcgcgcgttcctcgccgccggcgtgcgcgcactgcgggcggcgtac
cgcgagcgcggcagcgacctcctcgtccgtgagggcgacgccgaatccgtgctgccggcg
ctggccgacgagttcgacgccgacaccgtgttccacgccgcccactacgacgccgcacgg
cggaaccgccgcacgcgggtcgcggacgcgctcgccgccgcaggcgtcgacaccgcgggc
cacgtcgaccacacgctcgtcgaccccgcgaccctcgacgacgcctacccctctcacagc
cagttctacgacgactggcagcaggcaccgaaacccgacccggtgcccgcgccggacgcc
gacgcgctggccgacgtccacgacgaccacacgctctcggtcccggcccccgagccgccg
ctcccggatgcggggcacgcggccgccaccgaccgcctcgcggcgttcctcgacgacggc
atcgcgtcgtacaacgacacccgggacgacctcgcggcggcggtcgacgcccccgccagc
gctgtctcccggctgtcgccgtatctcgccgccggcaacatcggcgtccgggaggtgtgg
gcggccgtcgccgacgcctacgacgacgccaccgggaatgcggcgcggaacatcgggaaa
taccgctacgagctgtcctggcgcgagcagaactaccacctgctgtaccacaccccccgc
ctccagacggagaactacgtcagcttcgacgccccgatcgcgtggcagaacagcgacgac
cacttcgaggcgtggacccggggggagaccggctacccgctggtggacgccggcatgcgc
cagctccgcgcggaggggtacgtccacaaccgcccccggcaggtggtcgccagcttcctc
acgaaacacctcctggtggactggcggcgcggcgagcgccacttcgccgaccggctggtg
gattacgaccccgcgaacaacgccgcgaactggcagtggaccgcctccaccggcacggac
acggtcgccgtccgcatcttcgatccggtcagccagatggcgaaatacgattccgatgcg
gcgttcgtcaccgagtacgtccccgagctgcgcggcgtcgaccccgagaccatcgtggac
tggccgacgctgcgccactcccagcgcgaacgcctcgcgcccgactaccaccacccgatc
gtcgaccgcgatcacgcctacgagcgcgcccagcgcgtcttcgaagcggccctggacggg
gacgcgtga
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