Halobacterium salinarum NRC-1: VNG_1982C
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Entry
VNG_1982C CDS
T00038
Name
(GenBank) conserved hypothetical protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hal03016
]
VNG_1982C
Enzymes [BR:
hal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VNG_1982C
Transfer RNA biogenesis [BR:
hal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VNG_1982C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
DnaJ_CXXCXGXG
DUF7895
Anti-TRAP
THUMP
DUF7490
Motif
Other DBs
NCBI-ProteinID:
AAG20156
UniProt:
Q9HNR4
LinkDB
All DBs
Position
1463506..1464783
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AA seq
425 aa
AA seq
DB search
MTILEDARAVLAETPVCDACLGRCFAERSFGLSNAERGRALRTAVALADDEPYEEPEEPC
WVCEGASGRFDEFADLVVDAVADASFDTYQVGTQAPPLVEENEAMLRDLAGLAEDAGEPF
KSECNREVGKRVGDRTGTEVDFGRPDVLAVIDVEAETVDVTVNSAFVYGRYRKLERGIPQ
TKWPCSDCNGSGTLVDSPCPHCDGTGFLYPESVEQLTAPPVVDAMGGTEASFHGAGREDI
DALMLGTGRPFVIEVAEPQDRHPDADALADAINDFADGKAEVEGVAVAGYEMVERVKELD
ARKRYRADVEFDAPVGDDDLRDAIDELDGATIEQETPNRVDHRRAHLVRERDVYDITADR
EDDTHATVEIEGEGGLYIKELVSSDDGRTNPSLAGLLGVGAVVTALDVVAVAGETEAFED
TEHLP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctggaggatgcacgcgcggtgctggcggaaaccccggtgtgtgacgcctgc
ctggggcggtgtttcgcggaacggagtttcgggctgtcgaacgccgagcgcgggcgggcg
ctgcggaccgccgtggcgcttgccgacgacgagccctacgaggagcccgaggagccgtgc
tgggtgtgcgaaggggcgtccgggcggttcgacgagttcgcggacctcgtggtcgacgcc
gtcgcggacgcgtcgtttgacacctaccaggtggggacgcaggcgccgccgctggtcgag
gagaacgaggcgatgctgcgggacctcgccgggctggctgaggacgccggcgagccgttc
aaatccgagtgcaaccgcgaggtcgggaagcgcgtcggcgatcgcacgggcaccgaggtg
gacttcgggcggccggacgtgctcgccgtgatcgacgtcgaagccgaaaccgtcgacgtg
acggtgaactcggcgttcgtctacggccggtaccgcaaactcgaacgcgggatcccccag
acgaaatggccgtgctcggactgcaacggcagcgggacgctcgtggattcgccgtgcccg
cactgcgacggcacgggctttctctacccggagagcgtcgagcagctcaccgcgccgccg
gtcgtcgacgcgatgggcggcacggaggcgtcgttccacggcgcgggccgcgaggacatc
gacgcgttgatgctggggacggggcggccgttcgtcatcgaggtcgcggagccacaggac
cgccacccggacgccgacgcgctggcggacgcgatcaacgacttcgcggacggcaaagcc
gaggtcgagggcgtcgcggtcgcgggctacgagatggtcgagcgcgtgaaggaactcgac
gcccgcaagcgctaccgggctgacgtggagttcgacgcgccggtgggcgacgacgacctc
cgggacgcgatcgacgaactcgacggcgcgaccatcgagcaggagacgccgaaccgcgtc
gaccaccggcgcgcgcatctcgtccgcgagcgcgatgtctacgacatcacggccgaccgc
gaggacgacacgcacgccaccgtcgaaatcgagggtgagggcgggctctacatcaaggaa
cttgtgtccagcgacgacggccggacgaatccgagtctcgcgggcctgctcggcgtcggg
gccgtggtgacggcgctcgacgtggtcgctgtagcgggcgagaccgaggccttcgaggac
accgagcatctcccctga
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