Halobacterium salinarum NRC-1: VNG_2003G
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Entry
VNG_2003G CDS
T00038
Symbol
truA
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hal03016
]
VNG_2003G (truA)
Enzymes [BR:
hal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VNG_2003G (truA)
Transfer RNA biogenesis [BR:
hal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VNG_2003G (truA)
Prokaryotic type
VNG_2003G (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AAG20174
UniProt:
Q9HNP6
A0A510N853
LinkDB
All DBs
Position
complement(1482219..1483019)
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AA seq
266 aa
AA seq
DB search
MPRRAFRVAYDGRPYHGFQRQPDVSTVAGELFGALRRLDVFDGAKPPGYAAAGRTDAGVS
ARAQTVAFDAPAWLTPDAFTGALPDPIQVWAHADAPPEFHATHDAVARTYVYYWYAPDSR
ATDDRAAGALDRLTGTHDFHNLTPNTTNTVRELDATLDRDGAFRVITVRAGGFCRELVRR
VVSLVQLVTETGDTDRIDTVLGDEPVAGPDGVPPADPHPLVLHAVAYDGLSFTVDEDAAE
RARTTFRAARADHHERARVAGHLASI
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcgcgcgttccgggtcgcctacgacggccgcccataccacggcttccagcgc
cagcccgacgtctccacggtggccggcgagctgttcggcgcgctgcgccgcctggacgtc
ttcgacggcgcgaaaccgccggggtacgccgccgccgggcggacggacgccggcgtgtcc
gcgcgcgcccagacggtcgccttcgacgcgccggcgtggctgacccccgacgcgttcacc
ggcgcgctcccggaccccatccaggtgtgggcgcacgccgacgcgccgccggagttccac
gccacccacgacgcggtcgcgcgcacctacgtttactactggtacgcccccgacagtcgg
gccaccgacgatcgcgccgccggggcgctcgaccggctcaccgggacacacgacttccac
aacctcacccccaacaccaccaacaccgtccgcgagttggacgccaccctggaccgcgac
ggggcgtttcgcgtcatcaccgtccgggccggcgggttctgtcgggagctcgttcgccgc
gtcgtctcgctcgtccagctcgtcaccgagaccggtgacaccgaccggatcgacaccgtg
ctgggcgacgagccggttgccggcccggacggcgtgccgcccgcggacccacaccccctg
gtgcttcacgccgtcgcctacgacggcctctcgttcaccgtcgacgaggacgccgccgag
cgcgcgcgaaccacgttccgcgcagcccgcgcggaccaccacgagcgcgcccgcgtcgcc
ggccacctcgcctcgatctag
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