Halobacterium salinarum NRC-1: VNG_2051G
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Entry
VNG_2051G CDS
T00038
Symbol
rpoE''
Name
(GenBank) DNA-directed RNA polymerase subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
VNG_2051G (rpoE'')
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hal03021
]
VNG_2051G (rpoE'')
03019 Messenger RNA biogenesis [BR:
hal03019
]
VNG_2051G (rpoE'')
Transcription machinery [BR:
hal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
VNG_2051G (rpoE'')
RNA polymerase I system
VNG_2051G (rpoE'')
Messenger RNA biogenesis [BR:
hal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
VNG_2051G (rpoE'')
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
DZR
DUF7575
HypA
Zn_ribbon_15
Zn_ribbon_19
Zn_Ribbon_TF
DZR_2
Zn_ribbon_NOB1
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AAG20208
UniProt:
Q9HNL2
LinkDB
All DBs
Position
complement(1509474..1509671)
Genome browser
AA seq
65 aa
AA seq
DB search
MASNRLACHDCHRIVEPDEEMCPYCSSNSLTEDWAGYVVITHPDTSEIADKMEVHEAGEF
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatcgcctcgcgtgccacgactgccaccggatcgtcgagcccgacgaggag
atgtgtccgtactgctcgtcgaacagtctcaccgaggactgggcgggctacgtggtgatc
acccaccccgacacctcggagatcgcggacaagatggaagtgcatgaggccggcgagttc
gcgctgaaggttcggtga
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integrated database retrieval system
