Halobacterium salinarum NRC-1: VNG_2082G
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Entry
VNG_2082G CDS
T00038
Symbol
polC
Name
(GenBank) DNA polymerase bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VNG_2082G (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_2082G (polC)
Enzymes [BR:
hal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VNG_2082G (polC)
DNA repair and recombination proteins [BR:
hal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VNG_2082G (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAG20230
UniProt:
Q9HNJ0
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All DBs
Position
1529534..1530145
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AA seq
203 aa
AA seq
DB search
MDEPSQRDDTMDGAAVTACCTRCDALVESRSQVVNGDGPSDADVLFIGEAPGATEDDTGV
PFVGRSGDVLDDELAAAGLAREDVRITNCVRCRPPDNRDPHSEELANCRSHLVAEVDSVD
PAVIVTLGKVPSEHVLERSVAVTGEAGSVERVSLGGTTRDVVVCLHPAATLYDASQRPAF
RETIEQAATMAGADGGQARLGDY
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcccagccaacgggacgacaccatggacggggcggctgtgacggcgtgttgc
acgcggtgtgacgcgctcgtggagtcacgcagtcaggtcgtgaacggcgacggccccagc
gacgccgacgtgttgttcatcggggaggcgccgggcgcaaccgaggacgacaccggcgtg
ccgttcgtcgggcgcagcggcgacgttctggacgacgagctcgcggccgccgggctcgcc
cgtgaagacgtccgcatcacgaactgcgtccggtgtcggccgccggacaaccgcgatccg
cacagcgaggagctcgcgaactgtcggtcacatctcgtggccgaagtcgacagcgtcgac
cccgcggtgatcgtgacgctcggcaaagtccccagcgagcacgtcctcgaacggtcggtc
gccgtcaccggcgaggcgggcagcgtcgaacgggtgtcactgggcggcaccacccgggat
gtggtggtgtgtctgcatccggctgcaaccctctacgacgcgagccagcggccggcgttc
cgggagacaatcgagcaggccgcgacgatggcgggcgcggacggcgggcaggcccggctc
ggcgactactga
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