Halobacterium salinarum NRC-1: VNG_2210G
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Entry
VNG_2210G CDS
T00038
Symbol
endA
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hal
Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hal03016
]
VNG_2210G (endA)
Enzymes [BR:
hal01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
VNG_2210G (endA)
Transfer RNA biogenesis [BR:
hal03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
VNG_2210G (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
AAG20339
UniProt:
Q9HN82
A0A510N8R6
LinkDB
All DBs
Position
complement(1639397..1640428)
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AA seq
343 aa
AA seq
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MDGDLRGDTVHIGGDARQRFHDARGYGYPLGGNDIAVSLVEAAHLLFRGDLDSVDGMGFR
AFLTDREAGFAARFLVYVDLRDRGFYLVPDRDPWWRDPGDGDFVVFPRGNTRRDGVVKHR
VRVVDERTTLPVDGLSESVLAVVDEESEITYLDIAPETPTGETTLDRPTDVPGVLLDDRV
LVWEPPQRLHNAGFYGQPLGGRAADHDALQLSLVEAAYLIDAGVLRLTDATIDDVRARGR
LGEGEHFDCRLAVYRALRDAGAVPKTGFKFGADFRVYSAVSSVDDLGHSELLVRVITDTH
VFSPGDLSLDVRLAHGVRKRMVFAATDDTDDTIRWLSVSRLTP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgatctgcgcggggatacagtgcatatcggtggcgacgcccgccagcgattc
cacgacgcacgcgggtacggctacccgctgggcggcaacgacatcgcggtgtcgctcgtg
gaggccgcccacctcctgttccgtggcgacctcgattccgtcgacggcatggggtttcgg
gcgtttctcacggaccgcgaggcggggttcgccgcccggtttctggtctacgtcgacctc
cgggatcgggggttctacctggtgccggaccgcgacccgtggtggcgcgaccccggcgac
ggcgatttcgtggtgttcccgcgcgggaacacgcgccgcgacggcgtcgtgaaacaccgg
gtgcgcgtggtcgacgagcgcacgaccctccccgtcgacgggctctcggagtcggtgctg
gcggtcgtcgacgaggaaagcgagatcacctacctcgacatcgcccccgaaacccccacc
ggggagacgacgcttgaccgccccaccgatgtcccgggggtgttgttggacgaccgcgtg
ctcgtctgggagcccccacagcgcctgcacaacgccggcttctacggccagcccctcggc
gggcgcgccgccgaccacgacgccctccagttgtcgctcgtggaggcggcgtacctcatc
gacgccggcgtgttgaggctcaccgacgccaccatcgacgacgttcgtgcccgcgggcgg
ctcggtgagggcgagcatttcgactgccggctggccgtctatcgcgcgctccgtgacgcc
ggcgcggtcccgaaaaccggattcaagttcggcgccgacttccgcgtgtactcggcggtg
tcgtcggtcgacgacctcgggcactcggagctgctggtgcgcgtgatcaccgacacccac
gtgttctccccgggggacctctcgctcgacgtgcgactggcccacggcgtccgcaagcga
atggtttttgcggctaccgacgacacagacgacacgattcgctggctttcggtgagtcga
ttgacgccatga
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