Halobacterium salinarum NRC-1: VNG_2256G
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Entry
VNG_2256G CDS
T00038
Symbol
pcn
Name
(GenBank) proliferating-cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03030
DNA replication
hal03410
Base excision repair
hal03420
Nucleotide excision repair
hal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VNG_2256G (pcn)
03410 Base excision repair
VNG_2256G (pcn)
03420 Nucleotide excision repair
VNG_2256G (pcn)
03430 Mismatch repair
VNG_2256G (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hal03032
]
VNG_2256G (pcn)
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_2256G (pcn)
DNA replication proteins [BR:
hal03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
VNG_2256G (pcn)
DNA repair and recombination proteins [BR:
hal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
VNG_2256G (pcn)
MMR (mismatch excision repair)
Other MMR factors
VNG_2256G (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
VNG_2256G (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Motif
Other DBs
NCBI-ProteinID:
AAG20376
UniProt:
Q9HN45
LinkDB
All DBs
Position
complement(1678565..1679308)
Genome browser
AA seq
247 aa
AA seq
DB search
MFKAIVSADTLQETLDSVSVLVDECKIHLDDDTLSIRAVDPASVGMVDLDLAATAFESYE
ADGGLIGVNLSRLEDIAGMADAGQLIQLELDEETRKLHIQIDGLEYTLALIDPDSIRQEP
DIPDLDLPAHVAIEGRDIDRAVTAADMVSDHIALGVDTGDDLFYVNAEGDTDDVHLELAP
DQLIDLDAGDAHSLFSLDYLKDMNKAIPTTAEVELELGDEFPIKLHFDIADAQGHVTYML
APRIQSN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcgatagtaagcgccgacacgctccaggagacactcgactccgtgagcgtg
ctggtggacgagtgcaagatccacctcgacgacgacaccctctccattcgcgcagtcgac
cccgccagcgtcggcatggtcgacctcgatctcgccgccactgcgttcgaatcctatgaa
gccgacggcggcctcatcggcgtcaatctctcccggctggaggacatcgcgggcatggcc
gacgccggccagctcatccaactggaactcgacgaggaaacccgcaagctccacatccag
atcgacggcctcgaatacacgcttgcgctcatcgaccccgactcgatccgccaggaaccg
gacatcccggacctcgatctgcccgcgcacgtcgccatcgaaggccgcgacatcgaccgc
gcggtcaccgccgccgacatggtctccgaccacatcgcgctcggcgtcgacaccggcgac
gacctgttctacgtcaacgccgaaggcgacaccgacgacgtccacctcgaactcgcgccc
gaccagctcatcgacctcgacgccggcgacgcccacagcctgttcagcctcgactacctc
aaggacatgaacaaggccatcccgacgaccgcggaggtcgaactcgaactcggcgacgag
ttccccatcaagctgcacttcgacatcgccgacgcacaaggccacgtcacgtacatgttg
gccccgcgcatccagtccaactga
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