Halobacterium salinarum NRC-1: VNG_2441G
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Entry
VNG_2441G CDS
T00038
Symbol
rad3b
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03022
Basal transcription factors
hal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VNG_2441G (rad3b)
09124 Replication and repair
03420 Nucleotide excision repair
VNG_2441G (rad3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hal03021
]
VNG_2441G (rad3b)
03036 Chromosome and associated proteins [BR:
hal03036
]
VNG_2441G (rad3b)
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_2441G (rad3b)
Enzymes [BR:
hal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VNG_2441G (rad3b)
Transcription machinery [BR:
hal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VNG_2441G (rad3b)
Chromosome and associated proteins [BR:
hal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
VNG_2441G (rad3b)
DNA repair and recombination proteins [BR:
hal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VNG_2441G (rad3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Zot
SLFN-g3_helicase
AAA_22
AAA_34
ATPase
PhoH
Mg_chelatase
ArsA_ATPase
YdfZ
nSTAND3
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AAG20522
UniProt:
Q9HMP9
LinkDB
All DBs
Position
complement(1831314..1833512)
Genome browser
AA seq
732 aa
AA seq
DB search
MQFFPKPSPYDNQRAAMDAIRDALDGGTNVLFEGACGTGKTLAALAPALSHAQAEDKTVV
ITTNVHQQMRQFVREAREIHATEPIRAVVFKGKGSMCHIDVDYEECQVLRDNTHELVDAT
RDKRQLEERQRALLDEAQDGDTEAADARQAVMDELEAVESELAALQDGNVCERYRQNLVG
NTDEFYQWLYDDVRTPEDIYGYAEEAGFCGYELLKDGIEGVDLAVCNYHHLLDPGIRAQF
FRWLGRDPEDVVVVFDEAHNIEDAARDHAAETLTEQTLDSALDELQDTSDQRAAAAERVL
GAFRDALVETYEDALRPGGDGPADTKSAVESNWVDVPVANDDRRDDLTLAFLQSYTGPGI
TEDVTDALGLGEYLDGEYEDAYRNGDATTRRECHVLAAAEFVEAYVERGGEFGQYPTAAV
RRDDRTEAVYGRAERYTCIPREVTTDLFDAVHASVLMSATLRPFDVIGDVLGLDDPVELA
FGLQFPEDRRRTFAVDTEPLFSSNREDRATQQAVAGALRDAAAYTPGNCLFFFPSYAEAK
RYHDLLADCDATRYLDEPGVAADDLREAFVADGDGALFTSLWGTLAEGVSFDGDDARTVA
VVGVPYPHLDARTEAVQDAYAQAFADRDADQGLRSDRQDAGWRYAVEIPTVRKTRQAMGR
VIRSPEDFGVRMLVDRRYTAASRTGMQKYSVNPTFPPSERAEMVDVDPEKLRFSLLNFYG
DLGAYGGDPPAP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcttcccgaagccgtcgccgtacgacaaccagcgggccgcgatggacgcgatc
cgggacgcactcgacggcggcaccaacgtgttgttcgagggggcgtgcggaacgggcaaa
acccttgccgcgctcgcgccggcgctgtcgcacgcccaggccgaggacaaaacggtcgtc
atcacgaccaacgtccaccagcagatgcgccagttcgtgcgcgaggcccgcgagatacac
gccaccgaacccatccgcgcggtcgtgttcaagggcaaggggtcgatgtgtcacatcgac
gtggactacgaggagtgccaggtgctgcgggacaacacccacgagctcgtggacgccacc
cgggacaaacgccagctcgaagaacgccagcgcgctctgctcgacgaggcacaggacggc
gacaccgaggccgccgacgcccggcaggccgtcatggacgagctggaagccgtcgagtcg
gagttggcggccctccaggacggcaacgtctgcgagcgctaccgccagaacctcgtgggg
aacaccgacgagttctaccagtggctgtacgacgacgtccgcaccccggaggacatctac
ggctacgccgaggaggcggggttctgcgggtacgaactcctcaaggacggcatcgagggc
gtggatctggcggtctgcaactaccaccacctgctggacccggggattcgggcgcagttc
ttccgctggttgggccgggaccccgaggacgtggtggtggtgttcgacgaggcgcacaac
atcgaggacgccgcccgcgaccacgccgccgagacgctcaccgagcagaccctcgacagc
gccctggacgagctccaggacacgagcgatcagcgggcagcggccgccgagcgcgtgctc
ggggcgttccgggatgcgctcgtcgagacctacgaggacgcgctgcgtccgggcggcgat
ggaccggcggacacgaagtcggcggtggagtcgaactgggtggacgtgccggtcgccaac
gacgaccgccgggacgacctgacgctggcgttcctccagtcgtacaccggcccggggatc
accgaggacgtcaccgacgccctggggttgggggagtacctggacggggagtacgaggac
gcgtatcggaacggcgacgcgacgacccgccgggagtgccacgtgctggccgccgccgag
ttcgtagaggcgtacgtcgagcgcggcggcgagttcgggcagtatccgacggcggcggtg
cgccgcgacgaccgcaccgaggcggtgtacgggcgggccgagcgctacacctgcatcccg
cgggaggtgaccaccgacctgttcgacgccgtgcacgcaagcgtcctgatgagtgcgacg
ctgcggcccttcgacgtgatcggcgacgtgttggggttggacgaccccgttgagttggcg
ttcgggctgcagttcccggaggaccgccgccggacgttcgccgtcgacaccgagccgttg
ttctcctcgaaccgcgaggaccgcgcgacccagcaggcggtcgcgggcgcgctccgggac
gccgcggcgtacacgccgggcaactgtctgtttttcttcccgagttacgccgaggcgaag
cgctaccacgacctgctggcggactgcgacgccacgcggtatctggacgaaccgggggtg
gcggctgacgacctccgggaggcgttcgtcgccgacggggacggcgcgctgttcacgtcg
ctgtgggggaccctggccgagggcgtgagcttcgacggcgacgacgcgcggacggtcgcg
gtcgtcggcgtcccgtacccgcatctggacgcgcggaccgaggccgtccaggacgcgtac
gcccaggcgttcgcggaccgcgatgccgaccagggacttcgcagcgaccgccaggacgcc
ggctggcggtacgcggtggagatcccgaccgtgcggaagacccgccaggcgatggggcgc
gtgattcggtcgccggaggacttcggcgtgcggatgttggtcgatcggcggtacacggcg
gcgagccgcaccgggatgcagaagtattcggtgaacccgacgttcccgccgagcgagcgc
gcggagatggtggacgtcgatccggagaagctgcggttctcgttgttgaacttctacggc
gatctgggggcgtacggtggcgatccgccggctccgtag
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