KEGG   Halobacterium salinarum NRC-1: VNG_2612G
Entry
VNG_2612G         CDS       T00038                                 
Symbol
rli
Name
(GenBank) RNase L inhibitor homolog
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
hal  Halobacterium salinarum NRC-1
Brite
KEGG Orthology (KO) [BR:hal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hal03009]
    VNG_2612G (rli)
Ribosome biogenesis [BR:hal03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    VNG_2612G (rli)
SSDB
Motif
Pfam: ABC_tran AAA_21 Fer4_RLI SMC_N AAA_16 AAA_29 Fer4_6 Fer4 Fer4_7 NACHT Fer4_9 LdpA_Fe-S-bd Fer4_21
Other DBs
NCBI-ProteinID: AAG20650
UniProt: Q9HMC1
LinkDB
Position
complement(1952690..1954522)
AA seq 610 aa
MADDSIAVVDLDRCQPDRCNYECSNYCPPNRTGKECITLRGEDAGDGDPDQVHISEEICL
GESCGICVEKCPFDAIEIINLPQELDDQPTHRYGENSFSLYGLPVPESGKVTGLLGPNGI
GKSTAVDLLAGEVTPNLGRHESPPDWDEVVDEYRGTELQDYLAAVRDGDVDVAKKPQYVD
EIPAQFDGNTRQLLEATDERGVLDDLVDRLSIRPVMDQAIDSLSGGELQRVALAATLARD
ADFYFVDELTPYLDIGQRVTAARLVRELAEDADKAVLVVEHDLAVLDMLADSIHVAYGEP
SVYGVVTPPKSVRNGINEYLRGYLENENMRVRPEAIEFEEHAPRSASRRDTLVSYPDMTK
SYGDGEFTLSVEGGDINRNEVLGVVGPNGIGKSTFAQLLAGGLEPSSVGGEAGAALDVGL
DIAYKPQYVEADQQMRVDAFLSSVTDDVGTSYWQTEIADPLQLDPIMEQRLPDLSGGERQ
RVAIAATLSKDADLYLLDEPSAHLDVEQRVLATRAIRRFAENNESTVMVIDHDIYMIDLV
SDRLMVFDGEPAEHGQASPPQAMRSGMNEFLANLDVTFRRDERLGRPRINKPDSQLDKQQ
KRDGEYYYTT
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggcggacgacagcatcgcggtcgtcgacctggatcggtgtcagccggaccggtgtaac
tacgagtgttcgaactactgcccgccgaaccgcaccggcaaagagtgcatcacgctccgc
ggcgaggacgccggggacggcgaccccgaccaagtccacatcagcgaggagatctgtctc
ggggagtcctgtgggatctgcgtcgagaaatgtccgttcgacgccatcgagatcatcaac
ctcccccaggagctcgacgaccagccgacccaccgctacggggagaactccttctcgctg
tacgggctgccggtgccggagtccgggaaggtcaccggcctgcttggccccaacggcatc
gggaagtcgacggccgtcgacttgctcgccggggaagtgacgccgaacctcggccgccac
gagtcgccgcccgactgggacgaggtcgtcgacgaataccgcgggaccgagctccaggac
tacctggcggccgtccgggacggcgacgtcgacgtcgcgaaaaagccccagtacgtcgac
gagatccccgcacagttcgacggcaacacccgccagctgttggaggcgaccgacgagcgc
ggcgtgctcgatgacctcgtcgaccggctgtcgatccgtccggtgatggatcaggcgatc
gactcgctgtcgggcggggagctccagcgcgtcgcgctcgccgcgacgctcgcgcgggac
gccgatttctacttcgtggacgagctgacgccgtacctggacatcggccagcgcgtcacc
gcggcgcgcctcgtgcgggagctcgccgaagacgccgacaaggccgtgctcgtcgtcgag
cacgacctcgcggtcctggacatgctggcggactccattcacgtcgcgtacggtgagccg
tccgtctacggcgtcgtgacgccgccgaaaagcgtccgcaacggcatcaacgagtacctc
cgcggatacctcgaaaacgagaacatgcgcgtgcgcccggaggccatcgagttcgaggag
cacgcccctcggtcggccagccgccgggacacgctcgtgtcgtatcccgacatgacgaag
tcctacggcgacggcgagttcacgctgtccgtcgagggcggcgacatcaaccgcaacgag
gtgctgggcgtcgtcgggccgaacggcatcgggaagtcgacgttcgcgcagttgctcgcg
ggcggtctggagccgtcgagcgtcggcggcgaggcgggcgcggccctcgacgtggggctg
gacatcgcgtacaagccccagtacgtggaggccgaccagcagatgcgcgtcgacgcgttc
ctctcgtcggtcacggacgacgtggggacgagctactggcagaccgagatcgcggacccg
ctgcaactggatccgatcatggagcaacgcctgccggacctctccggcggggagcgccag
cgcgtcgccatcgcggcgaccctctcgaaggacgccgacctctatctgttggacgagccg
agcgcgcacctcgacgtcgagcagcgcgtgctcgcgacccgcgccatccggcggttcgcg
gagaacaacgagagcaccgtgatggtgatcgaccacgacatctacatgatcgatctggtg
agcgaccggctgatggtgttcgacggcgagcccgccgaacacgggcaggcgtcgcccccc
caggcgatgcgctcggggatgaacgagttcctcgcgaacctcgacgtgacgttccggcgc
gacgagcgcctcggccgcccgcgcatcaacaaacccgacagccagctcgacaaacagcag
aaacgcgacggcgagtactactacacgacgtga

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