Halobacterium salinarum NRC-1: VNG_2620G
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Entry
VNG_2620G CDS
T00038
Symbol
uvrD
Name
(GenBank) repair helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03420
Nucleotide excision repair
hal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VNG_2620G (uvrD)
03430 Mismatch repair
VNG_2620G (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hal03400
]
VNG_2620G (uvrD)
Enzymes [BR:
hal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VNG_2620G (uvrD)
DNA repair and recombination proteins [BR:
hal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VNG_2620G (uvrD)
MMR (mismatch excision repair)
Other MMR factors
VNG_2620G (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Herpes_ori_bp
DEAD
AAA_22
AAA_11
AAA_12
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
AAG20657
UniProt:
Q9HMB4
LinkDB
All DBs
Position
1960727..1962556
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AA seq
609 aa
AA seq
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MTDSEPEVTRLFGGPGSGKTTALLDHVEEILSEDDVSVRDILVVSYTRAAAAEVRERLAE
RLDMNPRSLRGNVATMHAKAYELLGLSRGDVVGESDKEAFCEEYGISFEDEYASGSRRTA
RSTTLGNKVIATSQWLQRTSRDVSEWYDVPFRWDDEEVRLPPEIDENAQVGNKYTPTWPS
SDERHDIPEAIRAWRTYKGENELVGFADMLERVEQRSLLPNVEYLVIDEFQDITSLQYDV
YEEWRPHMDRVLIAGDDDQVVYAWQGADPRLLLDTTVTDDQVLPNSYRLPSQVLEIVQQE
ISHIDTRQEKDLKPRKEGGSVEAIDSPSMLDLVRNVRRTVEATDDDTVMILFRARYQLFD
FVDEFIGDGIPFRALTDQRMWTDRLQQYINAVEALETDDDVNGLEARRLMDMLQDSAFGT
NDRSDLREAIDEAQGESTDLTELTFPAEFIRDYVPFVPGPSAAADMLRKVTRYQRRSIDA
YFEGDYRGMDPDRVRVGTIHSAKGREADHVFLATDLTEKVVEQMAATADPETVPDDVEFT
SKTSPVPILTDNERRVFYVGMSRARERLVLLQDLVGGAPTLPIDVLLYGERTGQTLADAL
DADTPVQIP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcggagccggaagtcacgcggctgttcggtggtccggggagcgggaaaacg
accgcgctcctcgaccacgtcgaggaaatcctcagcgaggacgacgtctcggttcgagac
atcctcgtcgtgtcgtacacgcgcgctgcagccgccgaggtccgggaacgactcgccgag
cgactcgatatgaacccgcgatccctgcgggggaacgtcgccacgatgcacgccaaagcc
tacgaactcctcgggttgtcccgtggggacgtcgtcggcgagagcgacaaggaggcgttc
tgtgaggagtacggcatctccttcgaggacgagtacgcctccgggtcgcgccggacggcg
cgctcgacgacgctggggaacaaggtcatcgccacctcacagtggctccagcgaaccagc
cgggacgtctcggagtggtacgacgttcccttccgctgggacgacgaggaggtccgcctc
cccccggagatcgacgagaacgcacaggtcgggaacaagtacacgccgacgtggccgtcc
agcgacgaacgccacgacatccccgaggcgatccgggcgtggcggacgtacaaaggcgag
aacgaactcgtcgggttcgcggacatgctcgaacgcgtcgagcagcgctcgctgctgccg
aacgtcgagtacctcgtcatcgacgagttccaggacatcacgagcctccagtacgacgtc
tacgaggagtggcggccccacatggatcgcgtcctcatcgcgggcgacgacgaccaggtg
gtgtacgcctggcagggcgccgacccccgcctgctgctcgacaccacggtcaccgacgac
caggtgttgcccaactcctatcggctcccctcccaagtgcttgagatcgtccaacaggag
atcagtcacatcgacacccgccaggagaaagacctgaaaccccgcaaggagggcggcagc
gtcgaagcgatcgacagcccgtcgatgctggatctcgtgcggaacgttcggcggaccgtc
gaggccaccgacgacgacacggtgatgatcctgttccgggcgcgctaccagctgttcgac
ttcgtggacgagttcatcggcgacggcatcccgttccgcgcgctcaccgaccagcggatg
tggaccgaccgcctccaacagtacatcaacgccgtcgaagccctggagaccgacgacgac
gtcaacggcctggaggcccgccggctcatggacatgctccaggattcggcgttcggcacc
aacgaccgcagcgatctccgggaggccatcgacgaggcccaaggcgagagcaccgacctc
acggagctgacgttccccgcggagttcatccgggactacgtgccgttcgttcccgggccg
tcggcggccgccgacatgctgcggaaggtcacgcgctaccagcgccgcagcatcgacgcc
tacttcgagggtgactaccgtggcatggatccggatcgggtgcgcgtcggcacgatccac
tccgcgaagggccgcgaggccgatcacgtcttcttggcgacggatctcacggagaaggtc
gtcgagcagatggcggcgaccgccgaccccgagacggtgcccgacgacgtggagttcacg
agcaaaaccagcccggtgccgatcctgactgacaacgagcgccgcgtcttctacgtgggg
atgagccgtgcccgcgagcgcttggtactgttgcaggacctcgtcggcggcgcgccgacg
ctccccatcgacgtgttgctgtacggcgagcggaccggacagacgcttgcggacgcgctg
gacgccgatacgccggtgcagatcccgtaa
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