Halobacterium salinarum NRC-1: VNG_2662G
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Entry
VNG_2662G CDS
T00038
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit C
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VNG_2662G (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hal03021
]
VNG_2662G (rpoC)
Enzymes [BR:
hal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VNG_2662G (rpoC)
Transcription machinery [BR:
hal03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
VNG_2662G (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AAG20691
UniProt:
P0CX07
A0A510N9V5
LinkDB
All DBs
Position
complement(1994558..1995751)
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AA seq
397 aa
AA seq
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MTEFDVTDGVHDVIEDTELPRRLKDEVLATAEERGVTKSQANEIATAVEAQYLDTRVDPL
DPVGTVSAQSIGEPGTQMTMNTFHYAGVAEMDVTQGLPRLIELVDARKTPDTPVMEVYLE
DEYAEERERAHEVVWKIEATKILALGDISTNVADMVVRIDLNEDTLQERWPRVDSTTQIA
GEVAETIEGNLGVTVTQDGTILEFGPSEPSYRELLQLVEQLRDIVFKGIEEVSRVVIRRE
ETERGEEFVLYTEGSAFKKALKIEGVDATRTSCNNIHEVHKTLGIEAAREAIINETMTTL
EEQGLDDVNIRHLMLVADIMTNDGTIESIGRHGISGNKNSVLARAAFEVTVNHLLDAAIH
GESDDLDGVIENVIVGKPVRLGTGDVDLRMGATQTSD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgactgagttcgacgtgacggacggcgtccacgacgtgatcgaggacaccgagttgcca
cggcggctgaaagacgaggtgctcgcgaccgccgaggagcgcggggtcacgaagtcccag
gcgaacgagatcgccaccgcggttgaggcccaatatttggacacgcgcgtcgacccgctc
gacccagtggggacggtgagcgcacagtccatcggggagccggggacgcagatgaccatg
aacacgttccactacgcgggcgtcgcggagatggacgtgacacaggggctgccgcggctc
atcgagctcgtggacgcccggaagacgccggacacgccggtgatggaggtgtacttggag
gacgagtacgccgaggagcgcgagcgcgcccacgaggtcgtctggaagatcgaggccacg
aagatcctcgcgctgggcgacatctccacgaacgtcgcggacatggtcgtccgcatcgac
ctcaacgaggacacgctccaggagcggtggccgcgggttgactccacgacgcagatcgcg
ggggaggtcgcggagacgatcgaggggaacctcggtgtgacggtgacccaggacggcacg
atcctggagttcggaccgagcgagccgtcgtaccgggagctcctgcagctggtcgagcag
ctccgggacatcgtgttcaagggcatcgaggaggtgtcccgggtcgtgatccggcgcgaa
gaaaccgagcgcggcgaggagttcgtcctctacaccgaggggtcggcgttcaagaaggcg
ctcaagatcgagggcgtcgacgccacgcgcacgtcgtgtaacaacatccacgaggtgcac
aagaccctcggcatcgaggccgctcgggaggcgatcatcaacgagacgatgaccaccctc
gaagagcagggcctcgacgacgtgaacatccgccacctgatgttggtcgccgacatcatg
accaacgacggcaccatcgagtcgatcggccgtcacggcatctcggggaacaagaactcc
gtgctcgcgcgggccgccttcgaggtgacggtgaaccacctcctggacgcggcgatccac
ggcgagagcgacgacctcgacggcgtcatcgagaacgtgatcgtcgggaagccggttcgg
ctcggaactggtgacgttgacctccggatgggcgcgacacagacgtcggactga
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