Halobacterium salinarum NRC-1: VNG_6389G
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Entry
VNG_6389G CDS
T00038
Symbol
tfbE
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VNG_6389G (tfbE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hal03021
]
VNG_6389G (tfbE)
Transcription machinery [BR:
hal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
VNG_6389G (tfbE)
Prokaryotic type
Archaeal type
TFB
VNG_6389G (tfbE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cas12f1-like_TNB
Auto_anti-p27
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AAG21002
UniProt:
Q9HHH8
A0A510NBC0
LinkDB
All DBs
Position
pNRC200:complement(307399..308322)
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AA seq
307 aa
AA seq
DB search
MTTSEPYERAFDEDIQRGTTEPCPECGGPVRTNSAETVCADCGLIIDEQSIDRGPEWHRD
DADTAKRTGAPLTPARHDRGLSTVIGSGQDARGTALSSEKRRRLARMRREQSRGRWRSTK
ERNLGHGLTEIRRIASALGLADSVRDQACQLFRTAQNERLLKGRSIEAMAAASVFGACRC
NGESWLIDDVAPMAQVGQNRVENAYTVLNEELGLPTPPVSLDQFVPRLASDLGCTDVVRR
RAEELVVQAVDAGITTGVHPSGFAAACLYMAACVHDAPLTQADAAAAAGVTVETIRSHRD
RLLSIVE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagtgaaccctacgagcgtgcgttcgacgaagacatccagcgtggtacaact
gagccgtgtcccgagtgtgggggcccggtgcgaacgaattcagccgaaacagtttgtgca
gattgcggactcatcatcgacgagcagtcgatcgaccgtggaccggagtggcaccgcgac
gacgccgatacagcaaagcgaacgggtgcaccactcaccccggcccgacacgaccgcgga
ctgtcgacggtgatcggcagcggacaggacgcgagggggactgccctctcgagcgagaag
cgtcgacgcctcgcgcggatgcgtcgcgaacagtcccgtggccgatggcggtccacgaag
gagcgcaacctcgggcatggactcacggagattcggcggatcgcgagcgcactcggcctc
gcggattcagtgcgtgatcaagcctgccagctgttccggacggcacagaacgaacgactg
ctcaaaggccgatcaatcgaggcgatggcggccgcgagcgtcttcggcgcctgccggtgc
aacggggagtcgtggctcatcgacgatgtggcgccgatggcgcaggtcggacagaaccgc
gtcgagaacgcctacacggtgctcaacgaagagttggggctgccgaccccaccagtcagc
ctggaccagttcgtcccgcgactcgcgtccgacctcggctgcacggacgttgttcgacgc
cgggcagaggagctcgttgtgcaggccgtcgacgccggcatcacgaccggcgtgcatcca
tccggattcgccgccgcctgcctgtacatggcggcgtgtgtccacgacgcgccgttgacg
caagccgatgccgcggcggccgccggggtgaccgtcgagacgatcaggagccatcgcgat
cggctgctctccatcgtagaatag
DBGET
integrated database retrieval system
