Halobacterium salinarum NRC-1: tbpB
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Entry
tbpB CDS
T00038
Symbol
tbpB
Name
(GenBank) TbpB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
tbpB (tbpB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hal03000
]
tbpB (tbpB)
03021 Transcription machinery [BR:
hal03021
]
tbpB (tbpB)
Transcription factors [BR:
hal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
tbpB (tbpB)
Transcription machinery [BR:
hal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
tbpB (tbpB)
RNA polymerase III system
TFIIIB
tbpB (tbpB)
RNA polymerase I system
SL1/TIF-1B
tbpB (tbpB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AAC82822
UniProt:
Q48325
LinkDB
All DBs
Position
pNRC100:complement(39879..40439)
Genome browser
AA seq
186 aa
AA seq
DB search
MSTLADTIHIENVVASSDLGQELALDQLSTDLPGAEYNPEDFPGVVYRLQEPKSATLIFR
SGKVVCTGAKSVDDVHEALGIVFGDIRELGIDVTSNPPIEVQNIVSSASLEQSLNLNAIA
IGLGLEQIEYEPEQFPGLVYRLDDPDVVVLLFGSGKLVITGGQNPDEAEQALAHVQDRLT
ELGLLD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctggcggacacgatccatatcgagaacgttgttgcatccagtgatctcggc
caagaactcgccctcgaccaactctccacagacctccccggcgccgagtacaacccagag
gacttccctggggtcgtctaccgcttgcaggagccgaagtcagccacgctgatcttccga
tcgggcaaagtcgtctgcaccggcgccaaaagcgtcgatgacgttcacgaagctctcggc
atcgttttcggtgacattcgcgagttaggcatcgatgtcacgagtaatccgcccatcgag
gtgcaaaacatcgtctccagcgcaagtctcgagcagtcgctgaacttgaacgcgattgcg
atcggcctggggctggagcaaatcgagtacgaacccgaacagttccccgggctcgtctac
cgccttgacgatcccgatgtcgtcgtcctcctcttcggcagtggcaaactcgtgattacc
ggcgggcaaaacccagacgaagccgagcaagcactcgctcacgtccaagaccgactcacc
gaactcggcctgcttgactga
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integrated database retrieval system
