Halobacterium salinarum NRC-1: tbpD
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Entry
tbpD CDS
T00038
Symbol
tbpD
Name
(GenBank) TbpD
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
tbpD (tbpD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hal03000
]
tbpD (tbpD)
03021 Transcription machinery [BR:
hal03021
]
tbpD (tbpD)
Transcription factors [BR:
hal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
tbpD (tbpD)
Transcription machinery [BR:
hal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
tbpD (tbpD)
RNA polymerase III system
TFIIIB
tbpD (tbpD)
RNA polymerase I system
SL1/TIF-1B
tbpD (tbpD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AAC82898
UniProt:
O52018
LinkDB
All DBs
Position
pNRC100:complement(128346..128906)
Genome browser
AA seq
186 aa
AA seq
DB search
MSTLTDTIQIENVVASTDLSQELALEQLATDLPGAEYNPGDFPGVIYRLDDPKSATLIFD
SGKAVCTGAQSVDDVHDAISIVVEDLRDLGIDIPPSPPVHVQNIVCSGSLDQDLNLNAIA
IGLGLEDVEYEPEQFPGLVYRLNDPDVVVLLFGSGKLVITGGSNPDDAHHALEIIHERLT
DLGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagtacactcaccgacaccatccagatcgagaatgtcgtcgcctcgaccgatctcagc
caggagttagccctcgagcaactcgcaactgacctccccggcgctgagtacaatcccggg
gattttcctggtgtcatctaccggctcgacgatccgaaatcggcgacgctcatcttcgac
tctggcaaagctgtctgcaccggcgcccaatctgtcgacgacgtccacgacgccatcagt
atcgtcgtcgaagacctccgcgacctcggtatcgacatcccgcccagtccgccggttcac
gtccagaatatcgtctgcagcggcagtctggaccaagatctgaacctgaacgcgatcgcc
atcggactcggcctcgaagacgtcgaatacgaacccgaacagttccccggcctcgtctat
cgcctcaacgaccccgatgttgtggtgttgttgttcggcagcggcaaactcgtcatcacg
ggtgggagcaacccagacgacgcccaccacgcactcgagatcatccatgagcggctcacc
gacctcggcctcctcgagtaa
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integrated database retrieval system
