Halorhabdus sp. CBA1104: Hrd1104_00485
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Entry
Hrd1104_00485 CDS
T06289
Name
(GenBank) twin-arginine translocation signal domain-containing protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrd1104_00485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hala02000
]
Hrd1104_00485
Transporters [BR:
hala02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hrd1104_00485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
AcMNPV_Orf101
Motif
Other DBs
NCBI-ProteinID:
QGN05916
UniProt:
A0A650A0T0
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All DBs
Position
complement(85530..87407)
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AA seq
625 aa
AA seq
DB search
MSDDSEMNRRRFLKATGAATVSIGLAGCGGGDTETESGETATETETESDGGDTGTEAEND
GYEPPSSYPYGLNEAKIGEAKRVMEEAGYGPDNNYDLDWLQYQSPAWKEMANTIRARLEA
AHINMNISDSDFGSLLETTQSGNHEAYTLGWVADYPGAQNFLQLVDPENTIYDAESYTPN
GETLFWSEDTKGDEEIRQYVTEQFDRVQNNPGLGDEAQSIRDEATINIERALWDSAALLP
VYHTVDQLFWYDRVDYNPPGGMGPSRAKDSISVNSLEGDDVLNGTSSTFSSLDPAASGNT
QSGDKVMNMFDAPMNYVNGTTEVESLIVEDYTVSDDLTEYEFTLKEGVQFHGDYGEVTAD
DVVYSMRRLIESDNSTNTYFPLSVLQIEHETDDDGNVVPETAAVEATGEYTFTISLAAPF
GYALEVLAYSAFSVVPEGIVGDIEGYDGDMAWEEFSTSPVGCGPFVFEQWQEGNGGEFRA
TAFEDYHGKVPDFDLHDAIITDTTALYSYFQNGNADVAGIPTAQYNPELATEESTNEQGQ
TLGTYGPMSDGTEVNMVSTPSINTYYIGFNMEKVPKPVREAMAYVLTREDFVESVFKGRG
EAAYHLVPKQVFPGGAEGYDSNYQE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacagtgaaatgaaccgacggcggttcctcaaagcgaccggcgctgcaacg
gtgagtatcggactggccggctgtggtggcggagacaccgaaaccgagagcggcgagacg
gcaaccgagaccgagaccgaaagcgacggtggagacaccggaaccgaggccgagaatgac
ggatacgagcctccaagttcctacccctatggcctcaacgaggcgaaaatcggtgaagcc
aagcgggtgatggaagaggcaggctacgggccagacaacaactacgatctcgactggctg
cagtaccagagcccggcgtggaaggagatggcgaacacgatccgtgcacgcctggaagcc
gctcacatcaacatgaacatcagcgactcggacttcgggtcgctgctcgaaaccacccag
agcgggaaccacgaggcctacacgctcgggtgggtcgccgactaccctggcgcccagaac
ttcctccagctcgtcgacccggagaacacgatctacgacgccgaaagctacacaccgaac
ggcgagacgttgttctggtccgaagacacgaagggcgatgaggaaattcgccagtacgtc
accgagcagttcgatcgggtccagaacaaccccggtctgggtgacgaggcccagagcatc
cgtgacgaggccaccatcaacatcgagcgagcgctgtgggactcggcggcactactcccg
gtctatcacaccgtcgaccagctgttctggtacgatcgcgtcgactacaacccgccgggc
gggatgggtccctcgcgagcgaaagacagcatctctgtcaacagcttagaaggcgatgac
gtcctcaatgggacctcgagcacgttcagctccctggacccggccgcctctgggaacacc
cagagcggggacaaggtgatgaacatgttcgacgcgccgatgaactacgtcaacgggacg
acggaagtcgaatccctcatcgtcgaggactacaccgtcagcgacgatctcaccgagtac
gagtttacgctcaaagagggggttcagttccacggcgactacggcgaggtgaccgctgac
gacgtcgtctactcgatgcggcgactcatcgagtcggacaattccacgaacacgtacttc
ccgctgtcggtgctccagatcgaacacgagaccgacgacgacggtaacgtcgtccccgag
acggccgccgtcgaagcgacgggcgagtacacgttcacgatttcgctcgccgcgccgttc
ggctacgcgctcgaagtgctcgcctactcggcgttctcggtcgtccccgaaggaatcgtc
ggtgacatcgagggctacgatggcgatatggcctgggaagagttctcgacgagtccggtc
ggttgtggaccgttcgtcttcgagcagtggcaagagggcaacggtggcgagttccgcgcg
acagccttcgaggactaccacggcaaagtccctgacttcgacctccacgacgcgatcatc
accgataccaccgccctttacagctacttccagaacgggaacgccgacgtcgctgggatc
ccgacggcccagtacaatcccgagctggctaccgaagagtcgaccaacgagcagggccag
acgctggggacgtacgggccgatgagcgatgggacggaagtgaacatggtctcgacaccc
tcgatcaacacgtactacatcggcttcaacatggagaaggtgccaaagcccgtccgcgag
gcaatggcctacgtgctcacccgtgaggacttcgtcgagagcgtcttcaagggccgcggt
gaagcggcctaccacttggttcccaaacaggtcttccccggtggagccgaagggtacgac
tcgaattaccaggaatag
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