Halorhabdus sp. CBA1104: Hrd1104_00625
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Entry
Hrd1104_00625 CDS
T06289
Name
(GenBank) RNA ligase
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Hrd1104_00625
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GFIT
Motif
Pfam:
Lig_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QGN05941
UniProt:
A0A650A0V2
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Position
complement(109191..110312)
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AA seq
373 aa
AA seq
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MDADRELAATLGVPEADLDALLEQFQRDTFEGRPYRHLPDARHGIERGTAIVDGVVVRGF
PSIPRTLVLDPGIERHFDGRLTVEEKRNGYNVRIARIDGDILGFTRSGYCCPYTTSKVRD
LLAPGDFFEDHPDCMLCGELIGPENPYTPHDYPEVDSATVEIFDVRHRESGTPLAVERRR
DLCETFALKQVPDFGEFAPTAAPDAVREIIADLDREGREGVVMQSLDGTRQLKYTTSATH
RADLEHAFSLPFDYGRDFLVSRLIREVFQAVELDHSKGQSRQRARELGEAILLPAIETVR
AVERDEAVGERHTVRGEPAVIEALLSHLRDQGLPLEIERDTREDGTRVVTFVKVAAATRD
NTRDYLDGKLIDE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgatcgcgaactcgcggcgacgctcggcgtacccgaggccgacctcgacgcg
ctgctggagcaattccaacgggacacgttcgaggggcggccctaccgccacctccctgac
gcccgccacggcatcgaacgcgggacggcgatcgtcgacggcgtggtcgtccgcggcttc
ccctcgatcccgcgaacgctggtcctcgatccgggcattgaacggcacttcgacggtcgc
ctcacagtcgaggaaaaacgcaacggctacaacgtccggatcgcccggatcgacggcgac
atcctcggattcacccggagtggctactgctgtccgtacaccacgagcaaagtccgtgac
ctgctcgctcccggcgacttcttcgaggaccatcccgactgcatgctgtgtggtgagttg
atcggccccgagaacccctacaccccacacgactaccccgaagtggactcggcaaccgtc
gagatcttcgacgtccgccaccgggagtccgggacaccactcgcggtcgagagacggcga
gatctctgtgagacgttcgcgctaaaacaggtccccgacttcggtgagttcgcgcccaca
gcggcacccgatgccgtccgggagatcatcgccgacctcgaccgagagggccgggaaggg
gtcgtcatgcaatctctcgatgggacccgacagctgaagtacacgacctcggcgacccac
cgggccgacctcgaacacgcgttctcattgccgttcgattacgggcgagacttcctggtt
tctcggctcatccgggaggtgttccaggcggtagaactcgatcactcgaaaggccagtct
cgccagcgagcccgggaacttggcgaagcgatcctcctgcccgccatcgagaccgtccgg
gcggtcgaacgggacgaagccgtcggcgagagacacacggtccgtggcgagccggccgta
atcgaggcactgctctcacatctgcgcgatcagggccttcccctcgaaatcgagcgggat
acacgcgaggacgggacacgcgtcgtcacgttcgtcaaagttgcggccgcgacccgtgac
aacacccgcgattatctcgacggaaaattgatcgacgaatag
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