Halorhabdus sp. CBA1104: Hrd1104_00945
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Entry
Hrd1104_00945 CDS
T06289
Name
(GenBank) GTP-binding protein
KO
K03231
elongation factor 1-alpha
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Hrd1104_00945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hala03019
]
Hrd1104_00945
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_00945
03012 Translation factors [BR:
hala03012
]
Hrd1104_00945
04131 Membrane trafficking [BR:
hala04131
]
Hrd1104_00945
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hala04147
]
Hrd1104_00945
Messenger RNA biogenesis [BR:
hala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Hrd1104_00945
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Hrd1104_00945
Translation factors [BR:
hala03012
]
Eukaryotic type
Elongation factors
Hrd1104_00945
Membrane trafficking [BR:
hala04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Hrd1104_00945
Exosome [BR:
hala04147
]
Exosomal proteins
Proteins found in most exosomes
Hrd1104_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QGN05995
UniProt:
A0A650A107
LinkDB
All DBs
Position
168863..170500
Genome browser
AA seq
545 aa
AA seq
DB search
MHSDRAVLEGAIERGEREGGSVEFKERLTRDLHSTDGRLESLAAQLRHRVLSGDGEATYV
VGVTDEGTIAGIDPDAFSESMDVLSLLAEEAGAHIADVETWGVDSAGNAIRGQTGQRGIV
GVATIREGAVLEDDEHIVIGTAGHVDHGKSTLVGSLVTGQPDDGQGGTRSFLDVQPHEVE
RGLSADLSYGVYGFDDDGPVRMDNPDRKTDRARVVEEADRLVSFVDTVGHEPWLRTTIRG
LVGQKLDYGLLTVAADDGPTKTTREHLGILLATDLPTIVAITKADLVDDKRVAAVEREVE
GLLRDVEKTPLVIDRHGVEAAVEEISETVVPVVRTSAVTLDGLDTLDELFERLPKTGGDE
TAQFRMYVDRSYNVTGVGAVASGTINAGRVEAGEELLLGPMADGSFREVEARSIEMHYHR
VEEARAGRIVGIALKGVEQQDVERGTVLLPREADPQPVREFEAEVMVLNHPTRIGEGYEP
VVHLETISEAAAFYPEGGQLLPGDSGRARVRFKFRPYLVEEGQRFVFREGRSKGVGTVTD
VTGVE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcattccgaccgggccgtcctcgaaggcgcgatcgagcgtggcgagcgggagggcggc
agcgtcgagttcaaagaacggctcacgcgggatctccactcgaccgacggccgattggaa
agtctggccgcacaactccgccatcgcgtactctctggtgatggcgaagcaacctacgtc
gtcggtgtcaccgacgaggggactatcgcaggcatcgaccccgacgccttttcggagtcg
atggacgtgctctctctgttggccgaagaggccggcgcccacatcgcggacgtcgagacc
tggggggtcgacagcgcgggcaacgcgatccggggccagaccggccagcggggcatcgtc
ggggtcgcgacgatccgtgagggcgcggtcttagaagacgacgagcacatcgtcatcggg
acggccggccacgtcgaccacggcaagtcgacgctcgtcggctcgctcgtcaccggccag
ccggacgacggccagggcgggacgcgatccttcctggatgtccagccccacgaggtcgaa
cgcggcctttcggcagacctctcgtatggcgtctacggattcgacgacgacggcccggtc
cggatggacaacccggaccggaaaacggatcgtgcccgtgtcgtcgaggaggccgatcgc
ctcgtgagcttcgtcgacactgtcggccacgagccgtggctccggacgaccatccgcggg
ctcgtcggccagaaactcgactacggacttttgactgtcgccgcggacgacgggccgacg
aagacgacccgtgaacacctgggtatcctgctggcgaccgatctcccgacgatcgtcgcg
atcacgaaggccgatctggtcgatgacaaacgcgtcgctgcggtcgaacgcgaggtcgag
ggactactgcgggacgtcgagaagacgcctctggtaatcgaccgccacggggtcgaggcc
gccgtcgaagagatttccgagaccgtcgtgccggtggtccggaccagcgccgtcacgctg
gacggactcgacacgctggacgaactcttcgagcgcttgccaaagaccggcggcgacgag
accgcccagttccggatgtacgtcgaccgctcttacaacgtcaccggcgtcggtgcggtc
gcctcggggaccatcaacgccgggcgcgtcgaggccggtgaggaactcctgctcggcccg
atggccgacggctcgttccgggaggtcgaggcccggagtatcgaaatgcactatcatcgc
gtcgaggaagcacgggccggccgcatcgtcgggatcgcactgaaaggtgtcgaacagcag
gacgttgagcgtgggacggtgctcctcccacgcgaggccgacccccagccggtccgggag
ttcgaggccgaagtgatggtgctcaatcacccgacgcggatcggcgagggctacgagccc
gtggtgcatctggagaccatcagcgaggccgccgcgttctaccccgagggcgggcaactc
ctgccgggcgacagcgggcgtgcgcgcgttcggttcaagttccggccgtatctcgtcgag
gaaggccagcggttcgtcttccgggaagggcgctcgaagggcgtcgggacggtaacggac
gtgaccggcgtggagtga
DBGET
integrated database retrieval system
