Halorhabdus sp. CBA1104: Hrd1104_01195
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Entry
Hrd1104_01195 CDS
T06289
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_01195
Enzymes [BR:
hala01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hrd1104_01195
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hrd1104_01195
Prokaryotic type
Hrd1104_01195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
KIX_2
Motif
Other DBs
NCBI-ProteinID:
QGN06041
LinkDB
All DBs
Position
207658..208542
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AA seq
294 aa
AA seq
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MTLRGPPEERSPAALLQFGVVNLDKPPGPSAHQVAAWMRDLADVERAAHAGTLDPKVTGC
LPMLVGDATRIAQVFDDSVKEYVAVLELHDRVQAADLARVATEFEGEIYQKPPKKSAVVR
RLRSREILDLDVLEQQDRQALLRVRCASGTYIRKLCHDIGLALGTGAHMDDLRRVGTEPF
DDSELVTLHDVTDALSWWRDNGDPEPLRDVVQPAERALVDLPAVTIAESAAASVAEGAPV
YAPGVIDADDGLDPAAEPLVACYTPNGAAVCLGRLVGEPTANAGPVVDLERVLV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacactccgtggcccgcctgaagaacgctcgcccgccgcattgctccagtttggggtg
gtcaacctcgataagccacccggcccctccgcccaccaggtcgccgcctggatgcgcgac
ctggccgacgtcgagcgggcggcccacgccggcacgctcgacccgaaggtgaccggctgc
ctgccgatgttggtgggtgacgcgacgcgcatcgcacaggttttcgacgatagcgtcaag
gaatacgtcgccgtcctggaactacacgatcgcgtgcaggcagccgatctggcgcgggtc
gccaccgaattcgagggcgagatctaccagaaaccacccaagaaaagcgccgtcgtccgc
cgcctccgcagccgggaaattttggacctggacgtgctggaacagcaagaccgacaggcc
ctccttcgtgtgcgctgtgcgagtggcacctacattcggaaactgtgtcacgatatcggc
ctcgccctggggactggcgcgcacatggacgatctccgccgggtcgggaccgagcccttc
gacgacagcgaattggtgacactgcacgacgtcaccgacgcgctttcgtggtggcgggac
aacggcgatcccgaaccactgcgagacgttgtgcagccagccgaacgggcgctggtcgat
ctccccgcggtgacgatcgccgagagcgccgcagcgtcggtcgcggaaggggcacctgtc
tacgccccgggcgtgatcgacgccgacgatgggctcgatcccgccgctgaaccgctcgtg
gcctgctacaccccaaacggggctgcggtctgtctcggacggctcgtgggggagccaaca
gccaatgcggggccggtcgtggacctcgaacgcgtgctggtataa
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