Halorhabdus sp. CBA1104: Hrd1104_01440
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Entry
Hrd1104_01440 CDS
T06289
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala00100
Steroid biosynthesis
hala00909
Sesquiterpenoid and triterpenoid biosynthesis
hala01100
Metabolic pathways
hala01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Hrd1104_01440
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Hrd1104_01440
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hala01006
]
Hrd1104_01440
Enzymes [BR:
hala01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Hrd1104_01440
Prenyltransferases [BR:
hala01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Hrd1104_01440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
QGN06086
UniProt:
A0A650A171
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All DBs
Position
complement(260449..261483)
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AA seq
344 aa
AA seq
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MADEQTERNELAWYYDAVTTVSRTFALTIDELREPMAREICLGYLLCRIADTVEDARHIP
PGERVALLETYSRALDPDDETSIEAFRTAVEPWLPAEPSDDWDVVARAPEAVGEFESLPA
ASRDVIRPSIRELVDGMATFVERYADTGGLRLQSFEELESYCWYVAGTVGEFVTSLLLEE
VDPGQRESFREDAESFALLLQLVNVAKDVATDYRTERNVYVPQPLLAEEGLEPADIADPS
SGAAFAPIITQIVERAERYLDGAQSWLETMPEVRGNTRAAWAIPFLLAVGTIRELKSNPA
AVVEAGSVTVSRQEVLAVRARFAGDNEPDIQALREELRQAPLGD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagcagaccgagcggaacgaacttgcgtggtactacgacgccgtgacgact
gtctcacggacgtttgcgctcaccatcgacgagttgcgcgagccgatggcccgggagatc
tgtctcgggtacctgctctgtcggatcgccgataccgtcgaggacgctcgccacatcccg
cccggggagcgggtcgcactcctcgagacgtacagtcgtgccctggacccggacgacgag
acgtcgatcgaggcgtttcggacggccgtcgaaccgtggctccccgccgagccaagcgac
gactgggatgtcgtcgctcgcgccccggaagccgttggggagttcgagtcgctcccggcg
gcttccagagacgtgatccggccgtcgatccgggagctcgtcgacggaatggcgacgttc
gtcgagcgatacgccgacaccggcgggcttcgcctccaatcgttcgaggagttggagtcg
tactgctggtacgtggccgggaccgtcggtgagttcgtcacgtcgctcttactcgaagag
gtcgacccgggacagcgagagtcgtttcgcgaagacgccgaatcgttcgcactgttgtta
cagctcgtcaacgtcgccaaagacgtcgcgacggactaccggacggaacggaacgtctac
gtgccacaacccttactcgccgaggaagggctcgaacccgcggacatcgccgatccgtcg
agcggggcggcgttcgcgccgatcatcacgcagatcgtcgagcgagccgagcgatacctc
gatggtgcacagtcctggctcgaaaccatgcccgaagtgcgtggcaacacccgggcggcg
tgggcgatcccgtttttactcgccgtcgggacgatccgagagctgaaatcgaacccggcg
gccgtcgtcgaagcgggcagcgtcaccgtctcccgccaggaagtgctggcggtccgggct
cgcttcgctggcgacaacgaaccggatatccaggctctacgagaagagctgcgccaggcg
ccactcggagactga
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