Halorhabdus sp. CBA1104: Hrd1104_01695
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Entry
Hrd1104_01695 CDS
T06289
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hrd1104_01695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hala03021
]
Hrd1104_01695
Enzymes [BR:
hala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hrd1104_01695
Transcription machinery [BR:
hala03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hrd1104_01695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
QGN06133
LinkDB
All DBs
Position
307100..310141
Genome browser
AA seq
1013 aa
AA seq
DB search
MSTGQSPKSIGKISFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGKHSGACNGHFGHIELAAPVIHVGFSKLIRRLLRGTCRECSRLTAVDAAKFTDGE
GAVDLAAAEAAAEEKKREFRQELRRTAELGNDLDDVLKSAIRQARSASRCPYCGAEQFDV
KHEKPTTYYEIIEVPHPEIEERLSMAMDPPEGEPVTPDELAEAIDDAFSAGRIRELLSGT
YRPDRNDIGALQQIGKALSRFNDLEEHLGEQLDFESASSYLLDEDMDKLMPSDIRDWFEE
IPDEDIEAIGINPDRSRPEWMILTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRIN
QRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKE
GRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVASEMTQTMNVNERNLEDARRYVA
NGPEAHPGANYVRRPDGRRLKVTEKNCEELAEKVEPGWEVARHLVDGDIIIFNRQPSLHR
MSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQML
SPRFGENIVGAIQDHVTAMYLLTNQNPTFNETQALDLLRATNVDTLPEPDGEEDGNAYWT
GRSIFSELLPDDLNLEFTSEAGDDVVIEDGQLVEGTIDDSAVGAFGGDVVDSIAKIYDKT
RARIFINEVSTLAVRTIMHFGFSISIDDESIPPNAAEQVDEAIDNAYERVQELITTYEQG
DLESLPGRTIDETLEMKIMQTLGQARDSAGDIAEDHFAEDNPAVVMADSGARGSMLNLTQ
MAGCVGQQAVRGERINRGYENRTLSHFKPNDLSADAHGFVEHSYREGLDPKEFFFHAMGG
REGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDTVVQFEFGEDGTSPVDVSS
SDDFDIDVESIADRIIDAEFDDDAAKAEFLEREALPTNLSEHADERWLAEGDD
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccggacaatcacccaagtcgatcggcaagatcagcttcgggctgatggaccca
gaggagtaccgggacatgagtgccacgaaggtcattacggccgacacttacgacgacgac
gggttccccatcgacatggggctgatggacccgcgactgggcgtcatcgaccctggcctg
gagtgtaagacttgcgggaaacactccggggcctgtaacggccacttcggccacatcgaa
ctcgccgcgcccgtgatccacgtcggcttctcgaaactcatccggcgactactgcgaggg
acctgccgggagtgttcgcgcttgaccgccgtcgatgccgcgaagttcaccgatggcgag
ggcgctgtcgacctcgcggccgccgaggccgccgccgaggagaagaaacgcgaattccgc
caggaactccgtcggacggcagagctgggcaacgacttagatgacgtgttgaagtcggcc
atccggcaggctcgctcggccagccggtgtccctactgtggggccgagcagttcgacgtc
aaacacgagaaaccgacgacctactacgagatcatcgaggttccccatccggagatcgaa
gaacgcctcagcatggcgatggatccgcccgaaggcgagcctgttacgcccgacgaactc
gccgaggccatcgacgatgccttcagtgcgggtcggatccgggaactgctctctggcacc
taccggcccgaccgcaacgacatcggtgccttacagcagatcggcaaggcgctttcccga
ttcaacgacttagaggaacacctcggcgagcaactggacttcgagagtgcgtcgtcgtat
ctcctcgatgaggatatggacaagctgatgcccagcgacatccgggactggttcgaggag
atcccggacgaggatatcgaggccatcgggatcaaccccgaccggtcccgacccgagtgg
atgatcctcaccgtgctgccggtcccgccggtgacggcccgcccctcgatcacgctggac
aacggccagcggagtgaggacgaccttacgcacaagctggtcgacatcattcggatcaac
cagcggttcatggagaaccgtgaggccggcgcgccccagctgatcatcgaggacctctgg
gaactgctgcagtatcacgtcactacgttcatggacaacgagatcagcggaacgccgccg
gcccggcaccgctcgggccgcccgctgaagaccctctctcagcgcctgaaaggcaaagag
ggccgttttcgtggatctctctcggggaaacgcgtcaacttctcggcacggactgtcatc
tcgccggacccgacactctcgctcaacgaggtcggagtgcccgaccgggtcgccagcgag
atgacccagacgatgaacgtcaacgagcggaatctcgaggacgcacgtcggtacgtcgcc
aatgggccggaagcccatcctggtgcaaactacgttcgccggcccgacggtcgccgactc
aaagtgaccgagaagaactgcgaggaactcgccgagaaagtcgaacccggctgggaggtc
gccaggcatctggtcgacggtgacatcatcatcttcaaccgccagccgtcgctgcaccgg
atgtcgattatggcccacgaggtcgtcgtgatgccctacaagaccttccggctgaacacg
acggtttgtccgccgtacaacgcggacttcgacggtgacgagatgaacatgcacgccctc
caaaacgaggaggcccgtgcggaggctcgcgtcctcatgcgggtgcaagaacagatgctc
tccccgcgctttggtgagaacattgtcggcgcgatccaggaccacgtcaccgcgatgtac
ctgctgaccaaccagaacccgacgttcaacgagacccaggctttggacctgttgcgggcg
accaacgtcgatacactgcccgaacctgacggggaagaagacggcaacgcctactggacc
ggccgctccatcttctcggaactcttgccggacgatctgaacctcgaattcacgagcgag
gccggcgacgacgtcgtcatcgaggatggccaactcgtcgaggggacgatcgacgacagc
gcggtcggtgccttcggcggagacgtcgtcgattcgatcgcgaagatctacgataagacc
cgtgcccgcatctttatcaacgaggtctcgacgctcgcggtccggacgatcatgcacttc
gggttctcgatcagtatcgacgacgagtcgatcccgcccaatgcggccgaacaggtcgac
gaggccatcgacaatgcctacgagcgcgttcaggaactgatcacgacgtacgaacagggc
gatctcgaatcgcttcccggccggacgatcgacgagacactggagatgaagatcatgcag
acgctcggccaggcccgtgacagtgcgggtgacatcgccgaagaccacttcgcagaggac
aatccggccgtggtgatggccgactccggggcgcgtggctcgatgctcaacctgacgcag
atggccggctgtgttggccaacaggcagtccgcggcgagcggatcaaccgcggatacgag
aatcggacgctcagtcacttcaaaccgaacgacctctcggcggacgcccacggcttcgtc
gaacactcctatcgtgagggactcgatcccaaggagttcttcttccacgcgatgggtgga
cgggaagggctggtcgacacggcagtccgtacctccaagtccgggtacctccagcgtcga
ctcatcaacgcgctgtcggaactggagactcaatacgacgggacagtccgagacaccagt
gatactgtcgtccagttcgaattcggcgaagacggtacctctccggtcgacgtctcctcc
agtgatgacttcgacatcgatgtcgaatcgatcgccgaccggatcatcgatgctgaattc
gacgacgacgcggcaaaggcggagttcctcgaacgggaggccttgccgacgaacctctct
gaacatgccgacgagcgctggctcgcggagggtgatgactga
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