Halorhabdus sp. CBA1104: Hrd1104_01995
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Entry
Hrd1104_01995 CDS
T06289
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_01995 (truD)
Enzymes [BR:
hala01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Hrd1104_01995 (truD)
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hrd1104_01995 (truD)
Prokaryotic type
Hrd1104_01995 (truD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QGN06182
UniProt:
A0A650A1F5
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All DBs
Position
complement(362946..364298)
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AA seq
450 aa
AA seq
DB search
MRQAHPLEQAVGMAYYVSDSDGVGGHLRREPAAFAVREIEAFDVESIDAERGAYPHVVFR
ATLSGWDTNDFANVLSDQLSISRERVSWAGTKDKHARTTQLFSATKVDPGALDGIDLSEV
EIEVLGRSGRPILFGDLAGNAFEIVVSEPDSPDRIEAVVDELATFAGSGFDGEGDATTVG
VPNFFGQQRFGSERPVTHEVGLAIARGDWKAAVLAYVGNPHEREREETREARAYVTETED
WAGALDRLPNRLGYERSMCHRLAENGANEPDDFRDALEAVPTNLQQLFVNAAQSYAFNRI
LSARLERGLPFDEPVAGDVVCFADSDAPDGLELPDTDRIQRVTEDNVGTVRRHCERGRAF
VTAPLLGSESELADGEPGEIERAVFDELGISPADFDLPGEFHSEGTRRAMLLRTALAVER
DPLTLSFALPKGSYATVVLREITKADPAAL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaggcacacccactcgagcaagcggtcgggatggcatactacgtcagcgatagc
gacggcgtcggcgggcacctccgccgtgagcccgcagccttcgctgtccgcgagatcgag
gctttcgacgtcgagtcgatcgatgccgagcgcggggcatatccccatgtcgtctttcgg
gcgaccctctcggggtgggacacgaacgacttcgcaaacgtcctctccgatcagctgtcg
attagccgcgaacgtgtctcctgggccgggacgaaagacaaacacgcccggacgacccag
ctgttctccgccacgaaagtcgatcctggggctctcgatgggatcgacctctcggaagtc
gagatcgaagtcttgggtcgaagcggcagaccgatcctctttggcgatctggccggcaac
gcgttcgaaatcgtcgtcagcgaaccggacagtccagaccggattgaagccgtcgtcgac
gaactcgccacgttcgccggcagtggattcgacggcgagggcgacgcgacgaccgtcggc
gtgcccaacttcttcggccagcaacggttcggcagcgagcggccggtcacccacgaggtc
ggcctcgccatcgcccggggcgactggaaagctgcggttctcgcctacgtcggaaatcca
cacgagcgtgagcgcgaggaaacccgtgaggcgcgggcatacgttacggaaacagaggac
tgggcgggcgcactcgaccggttgccaaaccggctgggctacgaacggtcgatgtgccat
cgtctggccgagaacggggccaacgagccagacgacttccgggacgccttggaggccgtc
ccgacgaatctccagcagctgttcgtcaacgccgcccagtcctatgcgttcaatcgtatc
ctctcggcacggctggaacgtggcctgcccttcgacgagccggtggccggcgacgtggtt
tgtttcgccgacagcgacgctcctgacggactcgaactgccggacaccgatcggatccag
cgtgtgaccgaagataatgtcgggacagttcgccgacactgtgagcgcggccgagcgttc
gtgactgcaccgctgctcgggtcggaaagtgagcttgcggacggtgagcctggtgagatc
gagcgggctgtcttcgacgagttgggaatcagtccggcggacttcgaccttccgggagag
ttccactcggaggggacgcgacgggcgatgttgctgcggacggctctggctgtcgagcgc
gatccgctgacgctctcgtttgcgctcccgaaaggttcctatgcgacggtcgtcctccgg
gagatcacgaaggcagatccagcagccctctga
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