Halorhabdus sp. CBA1104: Hrd1104_02135
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Entry
Hrd1104_02135 CDS
T06289
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hala03036
]
Hrd1104_02135 (smc)
Chromosome and associated proteins [BR:
hala03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Hrd1104_02135 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
CCDC39
AAA_15
AAA_21
ATG16
AAA_13
AAA_29
Fib_alpha
FKBP15
DUF1664
DUF3450
ERM_helical
DUF724
Fez1
EzrA
MscS_porin
CENP-F_leu_zip
Rod_CreS
APG6_N
Motif
Other DBs
NCBI-ProteinID:
QGN06207
LinkDB
All DBs
Position
396101..399676
Genome browser
AA seq
1191 aa
AA seq
DB search
MHITEVVLDNFKSFGRKTRIPFYEDFTTISGPNGSGKSNIVDAILFALGLARTSGIRAEK
LTDLIYNPGHQDGQRPDGEREASVTVVLDNADGTLSRSQVENAAGSQNVGDIEDIEIRRR
VKETEDNYYSYYYINGRSVNLGDIQDLLAQAGVAPEGYNVVMQGDVTEIINMTAGARREI
IDEIAGVAEFDKKKEQAFAELETVQDRIDEAELRIEEKETRLEQLEDERETALEYQELKD
EKDEYEAYKKAAELEDKRDDLAEIDAEIDELEATLEKRQRELDERQGKVLRLEAELEDLN
AEIERKGEDEQLQLKREIEEIKGEIARLEDAVESATEKREAAETDRREAFVQIDRKQETV
DDLETEIRETKVEKSSVKAEIDDLQVDLAAVEEEIEEVGAEYEEVRAELDAKKADLEEAK
ERRNDRQREQDRLLDEARRRSNQQREIESTIESQRESIPEIDAEIDDLEDERRKARKNRE
TIDEVVEDLQDEKRDLQADIEEIEDDLEAARQEYAELEARAEESGDGSYGRAVTTIQKAD
VAGVHGPVGDLGGVDPEYADACETAAGGRLANVVVADDGVGQRCIEHLKSRNAGRATFLP
MTEMHDRSLPSPPDLPGVVDFAYNLVDFDAQYSGVFSYVLGDTLVVEDMETARDLMGEFR
LVTLDGDLVEKSGAMTGGSSSGSRYSFSGGEGRLKRVAERITDLEDERTSVREELRDVEE
RLEDARDRRSEAAEQLREIQAEIERREREREEADERIEALESELDEIEREREDVSAQMDE
IEAEIEAIEAEIEDAEATIAQLESEIEDSELPALTDEAETIRAAIDEREDELEDLDAQLN
ELQLENQYAEEAIEDLHDEIESAQNRKAEQDERIEELEGEIDEQEALLADKEDAVAELEA
ELAELKGEREELREDVRAAREARDEHRERVNAVQSELESERETQQRLQWEIEELASAVGE
YDPDEIPDHHTVQTRIGQLESRMEALEPVNMLAIEEYDAVNEDLEDLQAKRETLVEEADG
IRERIETYEARKKETFMDAYEAIDEHFQDIFERLSNGTGRLHLENEDDPFDGGLTMKAQP
GDKPIQRLAAMSGGEKSLTALAFIFAIQRHNPAPFYALDEVDAFLDAANADLVGEMVDDL
AGEAQFVVVSHRSAMLERSERAIGVTMGEDNVSAVTGIDLSDTAGEVSADD
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcacagaggtcgtcctggacaatttcaagagcttcgggcgcaagacacggatc
cccttctacgaggacttcacgacgattagtggcccgaacggctcgggtaagtccaacatc
gtcgacgcgattctctttgcactcgggttggcccgcacgtcggggatccgtgccgagaaa
ctgactgatctcatctacaaccccggtcatcaggatggacagcgaccggacggcgagcgc
gaagccagcgtcaccgtcgttttagacaacgcagacggaaccctctcccgatcgcaggtc
gaaaatgccgccggcagccagaacgtcggtgacatcgaggacatcgagatcaggcgccgc
gtcaaagagaccgaagacaactactactcgtattattacatcaacggtcggtctgtcaat
ctcggagatattcaggacttactcgcccaggccggggtggctccggaagggtacaacgtc
gtcatgcagggcgacgtcaccgagatcatcaacatgaccgcgggtgctcgccgggagatc
atcgacgagatcgccggcgtcgcggagttcgacaagaaaaaagagcaggcctttgcggaa
ctggagaccgtccaagaccgtatcgacgaggccgaactccgtatcgaagaaaaggagaca
cgcctcgaacaactcgaagacgagcgcgagacggccctagaataccaggaactcaaagac
gagaaagacgaatacgaggcctacaagaaggccgccgaactggaagacaaacgcgacgat
ctggccgagatcgacgccgagatcgacgagctggaggcgaccctcgaaaagcgccagcgt
gaactcgacgaacgccagggcaaagtcctccggctcgaagcggagctagaagacctgaac
gcggagatcgagcggaaaggcgaagacgagcaactccaactcaaacgcgagatcgaggag
atcaaaggcgagatcgctcgcctcgaagacgccgtcgagagtgcgaccgagaaacgcgag
gccgccgagaccgaccgccgtgaggcttttgtccagatcgaccgcaagcaggagactgtc
gacgacctggagaccgagatccgggagaccaaagtcgagaaatcctccgtgaaagccgag
atcgacgacctgcaggtcgaccttgcggccgtcgaggaagagatcgaagaagtcggcgct
gaatacgaggaagtccgcgcggaactcgacgcaaagaaggccgatctggaggaggcaaag
gagcgccggaacgaccgccagcgcgagcaggatcgcctgctcgatgaggcccggcggcgc
tcgaaccagcaacgagagatcgaatcgaccatcgagagtcagcgggagtcgattcccgaa
atcgatgccgagatcgacgatctcgaagacgaacgccggaaggcacggaagaaccgcgag
acgatcgacgaggtagtcgaggaccttcaagacgagaaacgcgatctgcaagccgacatc
gaggaaatcgaagacgatctagaggcggcccgtcaggagtacgccgaactcgaagctcgc
gccgaggagtccggtgatggctcctatggccgggcggtcacgacgatccagaaggccgat
gtcgcgggcgttcacgggccggtcggcgacctcggtggcgtcgatcccgagtatgcagac
gcctgtgagacggccgcaggcgggcgactggcaaacgtcgtcgtcgcggacgacggggtc
gggcagcgttgcatcgaacacctcaagtcccgcaacgccgggcgggcaaccttcctgccg
atgaccgagatgcacgaccggtcgctgccctcgccgcccgatttgccaggcgtcgtcgat
ttcgcgtacaacctcgtcgacttcgacgcgcagtattcgggcgtgttcagctacgtcctc
ggcgacacgctcgtcgtcgaagacatggagacagcccgcgacctcatgggcgagtttcgc
ctggtgaccctggacggcgatctcgtcgagaagagcggtgcgatgactggtggctcctcg
agcgggtcccggtactccttttcgggtggcgaaggccgcctcaagcgagttgccgagcgg
atcacggacctagaggacgaacgcacgtccgttcgcgaggagctgcgtgacgtcgaggag
cgcttggaagatgcccgtgatcgtcgctcggaggcggccgagcaactccgggagatccag
gccgagatcgagcgccgcgaacgcgaacgcgaggaggccgacgagcgcatcgaagcgctg
gaaagcgagctggacgaaatcgagagagagcgcgaggacgtctccgcacagatggacgag
atcgaggcagagatcgaggctatcgaggccgagatcgaagacgccgaggcgacgatcgcc
cagcttgaaagcgagatcgaagactccgagctgccggcactgaccgacgaggcagagacg
atccgggcggcgatcgacgagcgcgaggacgaactcgaagatctagacgcccagctgaac
gaactccagctcgagaaccaatacgccgaggaggccatcgaggacctccacgacgagatc
gagtcggcccagaatcgcaaggccgagcaggacgagcgcatcgaggagctggagggcgaa
atcgacgaacaagaggcgttgctggccgacaaagaggacgcagtcgccgaactcgaagcg
gaactcgccgagctgaagggcgaacgcgaggagctccgtgaggacgtgcgagcggctcgc
gaggcccgcgacgagcaccgagagcgcgtcaacgccgtccagagcgaattagagagcgag
cgcgagacccaacagcgcttgcagtgggagatcgaggaactggcgtcggcggtcggggag
tacgatcccgacgagattcccgatcatcacaccgtccagacgcggatcggccagctcgaa
tctcgaatggaggccttagagccggtgaacatgctcgcgatcgaggagtacgacgcggtc
aacgaggatctcgaggatctgcaggccaaacgggagacgttagtcgaggaggccgatggg
atccgcgagcggatcgagacctacgaggcccgcaagaaggagacgttcatggacgcctac
gaggcgatcgacgagcacttccaggatatcttcgaacgactctcgaacggaacggggcgg
ctccatctcgaaaacgaggacgatcccttcgacggtgggctgacgatgaaggcccagccg
ggcgataagccgatccagcgactcgccgcgatgagcggcggcgagaagtcactgacggca
ctagccttcattttcgcgatccagcggcacaacccggccccgttctacgccctagacgag
gtggacgcgttccttgatgcggccaacgccgacctcgttggcgaaatggtcgacgacctc
gcgggtgaggcccagttcgtcgtcgtctcccatcgctcggccatgctcgaacgctcagag
cgggccatcggcgtgacgatgggcgaagataacgtcagtgccgtcaccgggatcgacctg
agcgataccgctggggaggtgtctgccgatgactga
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