KEGG   Halorhabdus sp. CBA1104: Hrd1104_02440
Entry
Hrd1104_02440     CDS       T06289                                 
Symbol
tuf
Name
(GenBank) translation elongation factor EF-1 subunit alpha
  KO
K03231  elongation factor 1-alpha
Organism
hala  Halorhabdus sp. CBA1104
Pathway
hala03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hala00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Hrd1104_02440 (tuf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hala03019]
    Hrd1104_02440 (tuf)
   03016 Transfer RNA biogenesis [BR:hala03016]
    Hrd1104_02440 (tuf)
   03012 Translation factors [BR:hala03012]
    Hrd1104_02440 (tuf)
   04131 Membrane trafficking [BR:hala04131]
    Hrd1104_02440 (tuf)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hala04147]
    Hrd1104_02440 (tuf)
Messenger RNA biogenesis [BR:hala03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     Hrd1104_02440 (tuf)
Transfer RNA biogenesis [BR:hala03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    Hrd1104_02440 (tuf)
Translation factors [BR:hala03012]
 Eukaryotic type
  Elongation factors
   Hrd1104_02440 (tuf)
Membrane trafficking [BR:hala04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    Hrd1104_02440 (tuf)
Exosome [BR:hala04147]
 Exosomal proteins
  Proteins found in most exosomes
   Hrd1104_02440 (tuf)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase Gtr1_RagA Septin FeoB_N SRPRB GTP_EFTU_D4
Other DBs
NCBI-ProteinID: QGN06260
LinkDB
Position
464224..465495
AA seq 423 aa
MSEDIAHQNLAIIGHVDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVM
DNLAEERERGVTIDIAHQEFDTDKYNFTIVDCPGHRDFVKNMITGASQADNAVLVVAADD
GVQPQTQEHVFLARTLGIDELIVAVNKMDLVDYEESRYRETVEEVTQLLKQVQFNTDNAS
FIPTSAFEGDNVETLSDNTPWYDGPTILESLNDLPEPQPPTDAPLRLPIQDVYTISGIGT
VPVGRIETGEMFPGDDVTFQPSDVGGEVKTVEMHHEEVDSAGPGDNVGFNVRGIGKDDIR
RGDVCGPAEEPPSVAETFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKIDPS
SGEVAEENPDFIQSGDAAVVTVRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLSVD
ERE
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgagtgaggacatagcgcaccagaacctcgccatcatcggacacgtcgaccacgggaag
tccactctcgtcggtcgcctcctgttcgagaccggcagtgttccggagcacgtcatcgag
cagcatcgagaagaagccgaagagaagggcaaaggcggcttcgagttcgcctacgtgatg
gacaacctcgccgaggagcgcgagcgcggggtcaccatcgacatcgcccaccaagagttc
gacactgacaagtacaacttcacgatcgtcgactgtcccggccaccgggacttcgtgaag
aacatgatcacgggcgcgtcccaggccgacaacgccgtgctcgtggtcgccgccgacgac
ggcgtccagccccagacccaggagcacgtcttcctggcccgtacgctgggcatcgacgag
ctcatcgtcgccgtcaacaagatggacctcgtcgactacgaggaatcccgctaccgggag
accgtcgaagaggttacgcagctgctcaagcaggtccagttcaacacggacaacgccagc
ttcatcccgacgtcggccttcgagggcgacaacgtcgagaccctcagcgacaatacgccg
tggtacgacgggccgacgattctggagtccctcaacgacctccccgaaccccagccgccg
acggatgcgccgctgcggctgccgatccaggacgtctacaccatctcgggcatcgggact
gtcccggtcggtcgaatcgagaccggcgagatgttccccggtgacgacgtgaccttccag
cccagcgacgtgggcggcgaggtcaagaccgtcgagatgcaccacgaggaagtcgacagt
gcgggccccggcgacaacgtcggattcaacgttcgtggcatcggtaaggacgacatccgt
cgcggcgacgtctgtggcccggctgaggagccgccgtcggtcgccgagaccttccaggcg
caggtcgtcgtcatgcagcacccgagcgtgattaccgccggctatacgccggtcttccac
gctcacacggcacaggttgcttgtacgatcgagtctatcgacaagaagatcgatccctcc
tccggcgaagtcgccgaggagaaccccgacttcatccagtcgggtgatgcggcggtcgtc
actgttcgaccgcaaaagccactcagcatcgagccgtcgagcgagattcccgagctcggc
agcttcgccatccgtgacatgggccagaccatcgcggctggcaaagtgctcagcgtcgac
gagcgcgaataa

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