Halorhabdus sp. CBA1104: Hrd1104_03000
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Entry
Hrd1104_03000 CDS
T06289
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_03000 (truA)
Enzymes [BR:
hala01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Hrd1104_03000 (truA)
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hrd1104_03000 (truA)
Prokaryotic type
Hrd1104_03000 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QGN06363
UniProt:
A0A650A2N0
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All DBs
Position
560200..561009
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AA seq
269 aa
AA seq
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MTARRAFRIAYDGRSFHGFQRQPDVATVSDAILDALRSLDVIDETVPDWYAAAGRTDAGV
SALAQTVTVEGPAWLSPAALNSALPAAIRAWASADVPADFHATHDAVEREYTYHLHAPSA
SLSRAKGALSALSGEHDFHNFTPDATGTVRDLTGDVERDEDFLVVAVRSDGFPRQFVRRL
LTVLKAVARGIAGRERIEHLLDSDPLDGPDGVAPAPPEPLVLTDVIYPDIAFERDPDAVE
SARDVFDGRAIDHRTNARVGSAIADGIDD
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgagacgcgccttccggatcgcctacgacggccgctcgtttcacggcttccag
cgccagccggacgtggcgaccgtctcggatgcgatcctcgacgcgctccgatccctggac
gtgatcgacgagactgtccccgactggtacgctgccgccggtcggaccgacgccggcgtc
tcggcgctggcccagactgtgacggtcgaggggccggcgtggctctcgcccgccgcgctc
aatagcgctctcccggcggccatccgtgcctgggcgagcgccgacgtgcctgccgacttc
cacgcgacccacgacgctgtcgagcgggagtacacgtaccatctccacgcgccgtcggcg
tcgctgtcacgcgccaagggagcactgtcggcgctgtccggcgaacacgacttccacaac
ttcaccccggacgcgacgggcacggttcgggacctcaccggtgacgtcgagcgtgacgag
gacttcctggtcgttgcagtccgttcggacggatttccccgacagttcgtccggcggctc
ctcaccgttcttaaggcggtggcgagggggatagctggacgcgagcggatcgaacacctg
ctcgactctgatcccctcgatggcccagatggcgtcgccccggcaccgccggaaccactc
gtcctgacggacgtcatctatccggacatcgcgttcgaacgcgatccagacgctgtcgaa
agcgcccgtgatgtcttcgacgggcgagcgatcgaccatcgaacgaacgcccgggtcggg
agcgcgatcgccgacggtatcgacgactga
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