Halorhabdus sp. CBA1104: Hrd1104_03620
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Entry
Hrd1104_03620 CDS
T06289
Name
(GenBank) AAA family ATPase
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hrd1104_03620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hala03032
]
Hrd1104_03620
Enzymes [BR:
hala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Hrd1104_03620
DNA replication proteins [BR:
hala03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
Hrd1104_03620
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
Hrd1104_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
Dna2
AAA_30
AAA_19
PDDEXK_1
Viral_helicase1
AAA_22
AAA_16
ResIII
UvrD-helicase
SLFN-g3_helicase
UvrD_C_2
NPHP3_N
DEAD
Helicase_RecD
AAA_25
SRP54
nSTAND3
bpMoxR
DO-GTPase2
DUF4245
AAA
AAA_24
PhoH
AAA_7
T2SSE
TrwB_AAD_bind
CbiA
AAA_5
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
QGN06471
LinkDB
All DBs
Position
679250..681958
Genome browser
AA seq
902 aa
AA seq
DB search
MHLRGPVLEVGESQTVSTQYGERDLAEVSIRPDEGRTAAVTVTLWGKWTETADVLEPGME
LAVYDADEREYRGERTYQTGEGTMVVVEPEFIVDVTDVRSWVQCPRMYYLNKLSGTPLAY
PVVKGTIVHEVFGDLLRGRDVETAVAERVEEVGLELGLLGRDAETVREDTRDHARAIEGW
LQQGHLTDGGQQTFGPAESEWRSEQTLISERYGLKGRADAVRRGMPVELKTGKNTNREPR
FQDKIQAAAYALVLGEHGEEPPNTGTLLYTKNAAVDRSEEGGDLSPAKEFSIGSGLLEFV
VRTRNEIAAMEHGMDVPTGYEADAKCEYCFEQDTCMAVSGRLDQESKAGQIGNAIPETER
TYFRRQYRAIEAERRAAHREYAKLWRQDKAERAAADRALIDLEPTGQRELDGGRWELRAK
ATGATSKIREGDVVLASDGDPIGGDAELARVQRLSDEIVVTADEPVELRRLDVYPSELST
DRMLTAVHDALLGQSDEEKAVLFGRQEPTFRDVGETFVENNPAQDRAVRRAVGAEDFALI
HGPPGTGKTYTLATLVDALVERGQRVLLSAFTNRAVDNAVEALLEQGVSNVVRMGTETGV
RDDLQHVRLDPAGDPDERATTLTDAPVVAATTATCGSRIMREQDFDVAVIDEAGQLTEPG
ALAAVARADRFVLVGDHQQLPPVVRSEGDVTGDAADLSQSLFERLIDAHPAAGVLLDRQY
RMAQRIQAYSSREFYDGQLRPANGAIAGQSLGDLDGADPSALPTSLRDRVAFIDPDGRAE
GNTNPTEAQTVAETVDSYLAAGLDPTDVGVIAPYRAQVAEIGQRVPEGVTVDTVDRFQGS
SKEVIVVSFVATGSLEGPIFEDYRRINVALTRAKRALVLIGDADALSTDERYGRMVAWAR
GD
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctgcgcggccccgtcctcgaagttggtgagtcacaaaccgtcagtacgcagtac
ggcgagcgcgacctcgcggaagtctcgattcgcccggacgaggggcgtacagcagccgtc
acggtcacgctgtggggaaagtggacggagacagccgacgtgctcgaacccggcatggaa
ctggctgtctacgacgccgacgagcgcgagtatcggggagagaggacctaccagaccggc
gaggggacaatggtcgtcgtcgagcccgagttcatcgtcgacgtgaccgacgtccgctcg
tgggtccagtgtccgcgcatgtactacctgaacaaactttctgggacgccgcttgcctat
cccgtcgtcaaggggacgatcgtccacgaggtctttggcgacttgctccgcgggcgtgac
gtcgagacagccgtcgccgagcgggtcgaagaagtcggcctcgaactcggcttgctgggc
cgagatgccgagaccgtccgcgaggacacacgcgaccatgctcgtgcgatcgaggggtgg
ctccagcagggccatctcaccgacggtggccagcagactttcggcccggccgaaagcgag
tggcgctcggaacagactctcatcagcgagcgctacggcctgaaagggcgggccgacgcc
gtccggcgcgggatgcccgtcgaactcaagaccggcaagaacacgaaccgagaaccccgc
ttccaggacaagattcaggccgccgcctacgcactcgtcctcggggaacacggcgaggag
ccgcccaatacggggacgttgctctacacgaaaaacgcggctgtcgaccgcagcgaggaa
ggtggcgatctctcgccggccaaggagttctcgatcgggtcgggcctgcttgagttcgtc
gtccggacgcgcaacgagatcgccgcgatggaacacgggatggacgtcccgactggctac
gaggccgatgccaagtgtgagtactgcttcgagcaggacacctgtatggcagtttcggga
cgcctcgatcaggaatcgaaggccggccaaattggcaatgcgatccccgagaccgaacgt
acgtacttccggcggcagtaccgtgcgatcgaggcggaacgccgcgctgcccaccgtgag
tacgccaaactctggcggcaggacaaagcggagcgggcggccgccgatcgcgcgctgatc
gacctcgaacccaccggccagcgggaactcgatggcggccgctgggagttgcgtgcaaaa
gccacgggcgcgacctcgaagatccgggagggtgacgtggtgctggcgagcgacggcgat
ccaatcggcggcgacgcggaactggcccgggtccaacgactgtccgacgaaatcgtcgtc
acggccgacgagccggtcgaactccggcggctcgatgtctacccgtcggaactgtcgacc
gaccggatgctcacggccgtccacgacgccctgctcgggcagtccgatgaggagaaagcc
gtcctctttggccgccaagaacccacgttccgcgacgtcggagagacgttcgtcgagaac
aatccggcccaggatcgggcggtccggcgagccgtcggtgccgaggacttcgcgttgatc
cacggcccgccggggacgggcaagacctacacgctcgcgacgctcgtcgacgccctcgtc
gaacgcggccagcgcgttctcctctcggcctttaccaatcgcgccgtggacaacgccgtc
gaggcactcctcgagcaaggcgtctcgaacgtggtgcggatggggaccgaaaccggcgtc
cgcgacgacctccagcacgtcagactcgatcccgctggcgatccggacgagcgggcaacc
acgctgacggacgcgccagtcgtcgccgcgacgacggcgacctgtggctcccgaatcatg
cgcgaacaggacttcgacgtggccgtcatcgacgaggcgggccagttgaccgaacccggc
gcgctggcggctgtcgcccgcgccgaccggttcgtcctcgtcggcgaccaccagcaactg
ccgccggtcgtccgcagcgagggcgacgtcactggagacgcggccgacctctctcaatcg
ctgttcgaacgcctgatcgacgcccatcccgcggccggtgtgctgctcgatcgccagtac
cggatggcccagcgcatccaggcctactcctcgcgggagttctacgacggccagttgcgg
cccgccaacggtgcgatcgccgggcaatcactcggcgacctcgatggggccgatccgtcc
gcgctgcccaccagcctccgggaccgagtggcgttcatcgacccggacgggcgcgctgag
gggaataccaaccctacggaagcccaaaccgtcgccgaaacagtcgactcgtatctggct
gccgggctcgatccgacggacgtgggcgtcatcgcgccctaccgtgcccaggtggccgag
attggccagcgcgtgcccgaaggcgtcaccgtcgataccgtcgatcgcttccagggatcc
agcaaagaggtgatcgtcgtctcgttcgtcgcgaccggcagcctcgaagggccgattttc
gaggactatcggcggatcaacgtcgccctgacgcgggcaaagcgggcgctggtactgatc
ggtgacgccgacgccctctcgacggacgagcggtacggtcggatggtcgcgtgggcacgt
ggcgattaa
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