Halorhabdus sp. CBA1104: Hrd1104_03795
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Entry
Hrd1104_03795 CDS
T06289
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Hrd1104_03795 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hala03400
]
Hrd1104_03795 (mutS)
DNA repair and recombination proteins [BR:
hala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Hrd1104_03795 (mutS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
LRIM1_dimer
AAA_27
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QGN06505
UniProt:
A0A650A2D4
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Position
complement(718740..721385)
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AA seq
881 aa
AA seq
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MTDAEGIVGEFLSLKAETDADLLAMQVGDFYEFFAEDAETVADELDLQISKKSSHGSSYP
MAGVPVDELMPYLKGLVERGYRVAVAEQHETANGHARDIERVVTPGTLLSATDAQARYLA
AVVVGDDEWGLAFADVTTGQFFVTSSPDRDAVFSELYRFNLTEVLPGPTVRTDDETLDRL
RERTDATLSLHATEAFAPGRARHRLRNQFGDETLDSVGLDTDPVIAAAGAVLAYVEETGQ
GVLASMTRLQRYGGGEHVELDATTQRNLELTETMQGEQSGSLLDTIDHTVTSAGTRTLRA
WLQRPRRSKTKLHRRQESVAALAGAAMARERLREELGDAYDLQRLASKAASGSADARDLR
AAAKTLALSETVREIVAETPDLSDSPLADRLAEVDQSAVRELQEKLDAAIVEDPPGTITE
GGIIRRGYDDELDEIIENHEAALEWIETLPDRESREHGITHLSVDRNKTDGYYIQVGNSE
TEKAPDHYENVKSLKNATRYTTDELEEREREILRLEEQRHELERELFEQLRDRVATRAQL
LQDVGAALAEVDVLTALATHAVRNDWTCPELVDSRTLDIEAGRHPVVEQATEFVPNDLRM
DGDRQFLIVTGPNMSGKSTYMRQAALIVLLAQIGSFVPARSATIGLVDGIYTRVGALDEL
AQGRSTFMVEMQELSNILHSATDESLVILDEVGRGTATFDGISIAWAATEYLHNEVRAKT
LFATHYHELTSLAEHLPRVQNVHVAADESDGDVTFLRTVRDGATDRSYGIHVADLAGVPD
PVVDRSRDVLDRLREEKAIEAKGGSGGTTQAVFDLSAGEFTAGNAASADGGDPEARDQIA
DRFGDDAEAVLDELTALDVNETPPVELLSQIQAWQDELDRR
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccgaggggatcgtcggggaatttctgtccctcaaagccgagactgacgcc
gacctgctggcgatgcaggtcggggacttctacgagtttttcgctgaggacgccgagacg
gtcgccgacgaattagatctgcaaatctcgaagaaatctagtcacggctcctcgtatccg
atggctggcgtccccgtcgacgagttgatgccgtatctcaagggacttgtcgaacggggc
tatcgcgtcgccgtcgccgaacaacacgagacggcaaacggccacgcccgcgatatcgaa
cgcgtcgtcacgcccgggacattgctctcggcgaccgatgctcaggcacgctatctggcg
gccgttgttgtgggcgacgacgaatggggactggcctttgccgacgtgacgaccggccag
ttcttcgtgacgagttcgcccgaccgggacgccgtgttcagcgaactctaccggttcaac
ctgacggaagtcctcccgggaccgacggtccggaccgacgacgagacactggatcggctc
cgcgagcgaaccgacgccaccctgtcgctgcacgcgactgaggcgttcgcccccggacga
gcgcgccaccggttgcgcaaccagttcggcgatgagacactggacagtgtgggactggac
acagatccagtaatcgcggctgccggggccgtcctcgcgtacgtcgaggagaccggccag
ggtgtgctggcttcgatgacacgcttgcagcgatacggcggcggggaacacgtcgaactc
gatgcgaccacccagcggaatttggaactcaccgagacgatgcaaggcgagcagtcaggg
tcgctgctcgatacgatcgatcacacggtcacgagcgccggaacccggacgctgcgagcc
tggttgcagcgcccgcgtcgatcgaaaacgaagctccatcgccgacaggaaagcgtggcc
gcactggccggggcggcgatggcacgagagcgcttgcgcgaggaactcggcgacgcctac
gacctccagcgactggccagcaaggccgcctccggcagcgccgatgcccgggaccttcgg
gccgcagccaagacgctcgccctttccgagacggtccgagaaatcgtcgccgagacgccc
gatctgtcggactcgccacttgccgatcggttggctgaagtagatcagtcggccgtacgc
gaactccaggaaaagttggacgcggccatcgtcgaggacccaccggggacgatcaccgag
ggcggaatcatccgacggggatacgacgacgaactagacgaaatcatcgagaaccacgag
gccgccctggagtggatcgagacgcttcccgaccgcgagagtcgcgaacacggtatcacc
cacctctcggtcgaccgcaacaagaccgacggctactacatccaggtcggcaacagcgag
accgagaaggcccccgatcactacgagaacgtcaagtcactgaaaaacgccacgcgctac
accaccgacgaactcgaagaacgcgaacgcgagattctccggctggaggaacagcgccac
gagttggagcgagagctgttcgagcaattgcgcgatcgcgtggcaacgcgggcacagctg
cttcaggatgtcggtgccgcgctggccgaggtcgacgtactcaccgccctggcaacccac
gccgtccgcaacgactggacgtgtccggaactggtcgattctcgcaccctggacatcgaa
gcgggccgtcacccggtggtcgaacaggcgacggagttcgtccccaacgacctccggatg
gacggagatcgccagttcctgatcgtcaccgggccgaacatgagcgggaagtcaacctac
atgcgccaggcggcactgatcgtcctgctggcccaaatcggctcgttcgtcccggcccgc
tcggcgaccatcggcctcgtcgacgggatctacacccgcgtcggcgcactggacgaactc
gcccagggtcgctcgacgttcatggtcgagatgcaggaactctcgaacatcctccactcg
gcgaccgacgagtcactggtcatcttagacgaagttggccgaggcacggcaaccttcgat
ggcatctcgatcgcgtgggccgccaccgagtacctccacaacgaagtgcgggcgaagacg
ctctttgccacccattaccacgaactcacgagcctggccgaacacctgcctcgcgtccaa
aatgtccacgtcgcagccgacgagagcgacggggacgtgaccttcctccggacggtccgg
gacggtgcgaccgatcgctcctatggcatccacgtcgccgatctggccggcgtgcccgat
ccggttgtcgatcgctcccgggacgtgctcgaccgcctgcgcgaggagaaagcgatcgag
gccaaaggcggctctggtggcacgacccaggctgtcttcgatctctcggccggcgagttc
accgccggaaacgcggcgagtgccgacggtggcgacccggaagcccgcgatcagatcgcc
gaccggttcggtgatgacgccgaggcggtcctcgatgaattaaccgccctggacgtcaac
gagacgccgcccgtcgaactcttatcacagatccaggcctggcaggacgaactggacagg
cgctga
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