Halorhabdus sp. CBA1104: Hrd1104_04450
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Entry
Hrd1104_04450 CDS
T06289
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hala03000
]
Hrd1104_04450
Transcription factors [BR:
hala03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hrd1104_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
MarR
HTH_Crp_2
HTH_IclR
HVO_A0261_N
HTH_11
HTH_45
HTH_20
HTH_13
HTH_5
HTH_27
TrmB
Fe_dep_repress
DUF7347
Rrf2
Mnd1
WHD_RNase_R
DUF7343
Rio2_N
SMC_ScpB
HTH_23
wHTH-PRTase_assc
TetR_C_7
LexA_DNA_bind
GntR
HVO_A0114
NMD3
HTH_28
HTH_Cmi2_C
WHD_RuvB
HTH_AsnC-type
Mrr_N
DUF4364
DnaD_N
Motif
Other DBs
NCBI-ProteinID:
QGN06617
LinkDB
All DBs
Position
complement(860744..861508)
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AA seq
254 aa
AA seq
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MIDVLDNKRAATRFRILVEIAERQPAVSQGEIAQAVGVTSQAVSEYIRELVEDGFVEKEG
RSRYRVTNEGVDWLFSAATDVRRFADHVTEDVLGSVQEDAALAVEPIVEGQSVALFMKTG
LLRARPGEDGATGVATTDADAGEVVGVTGFEGVIELQPGEVDILQVPPVRSDETPDLDRL
QTAAHDADLVTAAGVEAVGALKEAEITPTTHFAAGEVAADAASRGLSVVVVATTDVVGRV
TDALRDSDVSYTVR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgatagacgtcctcgacaacaagcgggcggcgacccgctttcggatcctggtggagatc
gccgaacgccagccggcggtgagtcaaggtgagatcgcccaggcggtcggcgtcacgagc
caggccgtcagcgagtacattcgtgaactcgtcgaggatgggttcgtcgagaaagaggga
cgctcacgatatcgcgtcacgaacgagggcgtcgactggctgttctccgcagcgacggac
gtccgtcggttcgccgatcacgtgaccgaagacgtccttggcagtgtccaggaagacgca
gccctcgccgtcgaacccatcgtggaaggccagtccgtggccctgttcatgaagacgggc
ttactccgggctcgcccgggcgaagacggtgcgacgggggtcgcgacgaccgatgccgac
gcgggagaagtcgtcggcgtcaccggattcgaaggcgtcatcgaactgcaacccggcgag
gtcgatattctccaggtgccgcccgtcaggtccgacgagacgccggatctcgatcgattg
cagacagcggcccacgacgcggatctcgttacagcggccggggtcgaagctgtcggtgca
ctcaaagaagccgagatcaccccgacgacacacttcgcggcgggtgaagtcgctgccgac
gcagcgagcagagggttgagcgtggtcgtcgtggcaacgaccgacgtcgtcggacgcgtc
actgacgcactccgggatagcgacgtctcttacacggttcgataa
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