Halorhabdus sp. CBA1104: Hrd1104_04785
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Entry
Hrd1104_04785 CDS
T06289
Name
(GenBank) bacteriocin biosynthesis protein SagD
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hala03009
]
Hrd1104_04785
Ribosome biogenesis [BR:
hala03009
]
Prokaryotic type
ribosomal protein modification factors
Hrd1104_04785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QGN06677
LinkDB
All DBs
Position
complement(918958..920670)
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AA seq
570 aa
AA seq
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MAVGIVGSGPAVAAIEAALEDVDVETQRRQALDPGADELGIVVDVAGATTFERANDTALE
AETPWIAVELGGVGGVPVVDAAITGFRSDSACYECLGTRVRANVDPSEQPTRAQPPATAR
YAGAIAGRAVASVLDPGTDGPDPFGTVIEVPHARRRVLAVPHCACGTEPDRTIGRERVDR
EVDESLGRAERGLDERVGLVREVGEVSSYPLPYYLAQSADTSGFSDASAANQAAGVALDW
NASLMKGFGEVYERYAAGVYRQANFQEGTPADVATPVPPSSFVGPSQPAKEATWSWIDGE
NLATSQTVQLPASLAVYPPPNERIRPATTTGLGFGNDAIEAMLAGLYEVIERDAAMLSWY
STFEPLGLSVEDDSFQTLIGRLEAEGLSVTTLLLTQDVDVPVVACAVHRAEQWPRFALGS
SAQLDPTEAARSALSEATQNWLELSRMGPEQAASAGGAIGEYASFPERVKQFIDAPSTVP
ATDVGVPDPPVGQAELEAVVERITKAGMTPYATRLTPRDIDELGFEATRVLVPKAQPLFL
GEPYFGDRLESVPPELGFEPRPDNAFHPFP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaggtatcgtcggatcggggccggccgtcgcggccatcgaggccgcactcgaa
gacgtcgacgtagagacacaacggcgccaggccctcgatcctggggccgacgagctgggt
atcgtggtcgacgtcgccggtgcgacgaccttcgaacgcgccaacgacactgccctggag
gcagagacgccctggattgcagtcgagctcggtggggtcggcggtgtcccggtggtcgac
gcggcaatcactggctttcggagcgatagtgcctgttatgagtgtctggggacccgagtc
cgtgcaaacgtcgatccgagcgaacagcccaccagagcccagcccccggcgactgctcgg
tacgcaggcgcaatcgctggccgggccgtcgcaagcgtcctggatcccgggacagacggc
ccagatcccttcgggaccgtcatcgaggtaccacacgctcgacgacgagttttggccgtc
cctcactgtgcgtgcgggacggaaccggaccggacgatcggccgggaacgggtcgatcgc
gaggtcgatgagtctctgggacgagccgagcgcggtctcgacgagcgggttggcctcgtc
cgcgaagtgggcgaagtctcgtcctatccgctgccgtactacctggcccagtccgccgat
accagtgggttcagcgacgccagtgcggccaatcaggcagcgggcgtggccctagactgg
aacgcatcgctgatgaaagggttcggtgaagtatacgagcgatacgcagccggcgtctat
cgacaagcgaacttccaggaaggcacgccagcggatgtagcgacgccggtcccgccgtcg
tcgttcgtcggcccgtcgcaaccggccaaagaggccacgtggtcgtggatcgacggggag
aacctcgcgacgagccaaacagtccaactcccggcgtcgctggctgtctacccgccaccg
aacgaacggattcggccggcaacgaccaccggccttggctttggaaacgacgcgatcgaa
gccatgcttgcgggcctgtacgaggttatcgaacgcgatgcggcaatgctgtcgtggtac
tcgacgttcgaacccctcgggttgtccgtcgaggacgacagcttccagacgctgattgga
cgattggaggccgaggggttgtcggtcacgacgctgctgctcacccaggacgtcgatgtc
ccggtcgtcgcctgtgccgtccaccgggccgagcagtggccccggttcgcactcggatcg
agtgcgcagctcgacccgaccgaggccgcccgatcggccctttcggaagccacccagaat
tggctcgaactgtcccggatggggccagagcaagccgccagtgccggcggagcaatcggc
gagtacgcatctttccccgagcgcgtcaaacagttcatcgacgccccgagtacggtgcca
gcgacggatgtcggggtgcccgatccgccagtagggcaagctgaactcgaagccgtcgtc
gagcgtatcacaaaagcaggtatgacgccgtacgcgacacggctaacgccacgcgatatc
gacgagcttggtttcgaagcaacccgtgtcctcgtcccgaaagcccaaccgttgttcctc
ggggagccgtacttcggcgaccggctcgaatcggtgccgccggaactgggcttcgaaccg
cgcccggacaacgccttccacccgttcccgtga
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