Halorhabdus sp. CBA1104: Hrd1104_04850
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Entry
Hrd1104_04850 CDS
T06289
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_04850
Enzymes [BR:
hala01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
Hrd1104_04850
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
Hrd1104_04850
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
End_beta_propel
Motif
Other DBs
NCBI-ProteinID:
QGN06688
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Position
931454..933106
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AA seq
550 aa
AA seq
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MSSDAVSERDPFEAACEELIERILDGDLDRDGLEAAKREVCSTYSAQKVPKNSALLDRAP
DGRREELAAVVRRKPMRTASGVSPVAVMTSPENCPHGKCLYCPGGPDSEFESSQSYTGQE
PAAARGVQNEYDPYGQVTLRLHQLRKIGHPIEKVELILMGGTMTARSHDYQEWFVKRALA
AMNDYDVDCDPQPSETENFAQDPSEYDFQYLEDVIAENETGDVRNIATTFETKPDWCGPE
QVDRMLRLGGTKVEVGVQTTFEAINREMHRGHGVDASIEANRRLRDAGFKVGFHMMPGQP
GMSAEMVREDFRRLFERPEWRPDYLKIYPTLVVGGTVTYDMHRRGEFDPLTSEEAAELVA
DVKPTIPRYTRLQRVQRDIPAPLIESGVKKSNLRQLARQRMESRGESCSCIRCREVGHRD
EEPEDVTLSVETYTVAGGTEHFISFEDRAHDLLVGFCRLRFPSEVVRRELEDAAVVRELH
VYGSEVAIGDSGGEDWQHQGYGRRLIERAETLAVEAGYEKLAVLSGIGAREYYRDQLDYQ
QDGPYVSKRL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgacgctgtgagcgaacgcgacccgttcgaggctgcgtgcgaggagttgatc
gaacggattctcgacggcgacctcgaccgtgacggcctcgaagctgcaaagcgggaggtc
tgttcgacgtacagcgcacagaaagtgccaaagaactccgcgttactcgaccgggcgccc
gacgggcggcgtgaggaactggctgccgtcgttcgtcgcaagccgatgcggacggcctcg
ggggtatcgcccgtggccgtgatgacctcgcccgagaactgcccgcacgggaagtgtctg
tactgtccgggcggcccggattcggaattcgagagttcacagagctataccggccaggaa
ccggccgcagccaggggtgtccaaaacgagtacgacccctacgggcaggtgacgctgcgc
ttgcaccaactgcggaaaatcggccatccgatcgagaaagtcgaactcatcttgatgggc
gggacgatgactgcccgcagccacgactaccaggagtggttcgtcaagcgtgccctggcg
gcgatgaacgactacgacgtcgattgtgacccacaaccatccgagaccgagaacttcgcc
caggacccctcggaatacgactttcagtatctggaagacgtcatcgcagagaacgagact
ggcgacgtgcgtaacattgcgaccaccttcgagaccaaacccgactggtgtggtcccgaa
caggtcgatcgcatgcttcgccttggcgggacgaaagtcgaggtcggcgtccagacgacc
ttcgaagcgatcaaccgcgagatgcaccgtgggcacggcgtcgacgcctcgatcgaggcc
aatcgacgcctccgcgatgccgggttcaaggtcgggtttcacatgatgcctggccagccc
ggcatgtccgcggagatggtccgggaggacttccggcggcttttcgagcgacccgagtgg
cgaccggactacctcaagatctacccgacgctggttgtcggcgggaccgttacctacgac
atgcaccgccgtggagagttcgacccgctgaccagcgaggaagccgcggaactcgttgcc
gacgtcaagccaacgatcccacgctacacccggctccagcgcgtccaacgagacattcca
gcaccgttgatcgagtctggggtcaaaaaatcaaatctccggcagcttgcccgacagcgg
atggaatctcggggcgagtcgtgctcgtgcatccggtgtcgagaagtcggccaccgcgac
gaggaacccgaggacgtgacgctttcggtcgagacctacactgtcgccggcgggaccgaa
cacttcatcagcttcgaagatcgcgcacacgacctactcgtgggcttttgtcggctccgc
ttccccagtgaggtcgtccgccgagagctcgaagatgccgccgttgtcagggagttacac
gtctacgggagtgaagtcgccatcggtgactctggaggcgaagactggcaacaccagggg
tacgggcggcgactgatcgaacgcgcagagacattggccgtcgaggctggctacgaaaaa
ctcgccgtcttgagcgggatcggcgcacgagagtactatcgcgatcaactcgactaccag
caggacgggccgtacgtgagcaaacgtctctga
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