KEGG   Halorhabdus sp. CBA1104: Hrd1104_06020
Entry
Hrd1104_06020     CDS       T06289                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
hala  Halorhabdus sp. CBA1104
Pathway
hala03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hala00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Hrd1104_06020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hala03032]
    Hrd1104_06020
DNA replication proteins [BR:hala03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     Hrd1104_06020
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_22 DNAX_ATPase_lid AAA_16 RuvB_N AAA_33 AAA_5 nSTAND3 AAA_14 AAA_assoc_2 AAA_28 NACHT AAA_lid_RFC1 IstB_IS21 AAA_25 AAA_18 AAA_2 DUF6567 RNA_helicase Mg_chelatase DUF815 Hydin_ADK
Other DBs
NCBI-ProteinID: QGN06895
LinkDB
Position
1169338..1170831
AA seq 497 aa
MTDWTEKHRPSTLAEVRGNDKARDALAEWAETWPDHREAVILHGSPGVGKTSAAHALAAD
LDWPTIELNASDARTKAVIERVAGEAAKSGTLTEGGAGRRLLILDEADNLHGNADRGGAR
AITGVVNEASQPMVLIANEFYEMSNGLRNACRDIEFRDVSTRSIVPVLRDICRQEDVGFE
DDALQKIAEANDGDLRGAIKDLQAAADGRETITAEGVVTGDRDRTTGIFDYLDAVLKEAD
AQQALEGSYDVDETPDDLISWIEDNMPKEYEGAELARAYRSLSTADRWLGRVRATQNYSF
WRYAADNMTAGVAAARDGKKSGWTRYGPPSYWSKLGRTKGARGTRDDVARAIAQTSGVSM
STARRKILPHLEVITHHCKNREATVAMAAAYDLSAEHVAFVTGSGEDTNKVQSIVEDAHQ
LREEAAVEGSEGAFEPGSDEGDPSDEAESAAEGDTRVTAADEDDTSTSVERDDASDSGQR
DAQENEDDQQTGLGDFV
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgactgactggacggaaaaacaccgcccatcgacgctcgcggaggtgcggggcaacgac
aaggcccgcgacgcactcgccgagtgggccgaaacctggcccgaccaccgcgaagccgtc
attctccatggctcgccgggcgtcggaaagacctctgcagcccacgcccttgcagccgat
ttagactggccgaccatcgagttgaacgcaagcgacgcccggacgaaagccgtcatcgag
cgcgtcgccggcgaagcggccaaaagcgggacgctgaccgaaggcggggctggtcgacgc
ctcctcatcctcgacgaggcggacaacctccatgggaacgccgatcgcggaggggcacgg
gcgatcaccggcgtggtcaacgaggccagccagccgatggtgctgatcgcaaacgagttc
tacgagatgtcaaatggcctccggaacgcctgccgcgacatcgaatttcgggacgtttcg
acacgctcgatcgtccctgtgttgcgagatatctgtcgccaggaagatgtcggcttcgag
gacgacgccctgcagaagatcgccgaggccaacgacggcgacctccggggagcgatcaag
gacttacaggcggccgcggacggtcgggagacgataactgccgagggcgtcgtcactggc
gatcgtgaccggacgacgggtatcttcgactatctggacgccgttctcaaggaagccgat
gcccagcaagccctggagggatcctacgacgtcgacgagacgcccgacgacctcatctcc
tggatcgaagacaacatgccaaaggagtacgagggcgcggaactggcgcgggcgtatcgg
tcgctatcgactgcagatcgctggctcggccgggttcgggccacccagaactactccttc
tggcggtacgccgccgacaacatgacggccggcgtggcggccgcccgtgacggcaagaaa
agcgggtggacgcgctatgggccaccgagttactggtcgaaactcggccggacaaagggg
gcacgcgggacccgcgacgacgtggcgcgggcgatcgcccaaaccagcggcgtcagcatg
agtacggcccgccggaagatccttccacatctggaagtcatcacccatcactgcaagaac
cgcgaggcgacggtcgcgatggccgccgcctacgatctgtcggccgaacacgtggctttc
gtcaccgggagcggcgaagacacgaacaaggtccagtcgatcgtcgaagacgcccaccaa
ttgcgcgaggaagctgccgtcgagggctctgaaggggcgttcgagcctggttcagatgaa
ggcgatccaagcgacgaggccgagagtgccgccgagggagacaccagagtgacagccgcg
gacgaggacgatacatcgacgagtgtcgagcgtgacgacgcgagcgattccggtcagaga
gatgcccaagagaacgaagacgaccagcagaccggcctcggcgatttcgtctga

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