Halorhabdus sp. CBA1104: Hrd1104_06435
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Entry
Hrd1104_06435 CDS
T06289
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hala03000
]
Hrd1104_06435
Transcription factors [BR:
hala03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hrd1104_06435
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Ortholog
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GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
HTH_IclR
HTH_27
PadR
Rrf2
FaeA
DUF6381
Motif
Other DBs
NCBI-ProteinID:
QGN06965
UniProt:
A0A650A3M7
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Position
complement(1257249..1258382)
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AA seq
377 aa
AA seq
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MEPDELQAALENAGLTAYQAEAYLTVLDLGMTPAVKVAQNSSIPTSQIYKILRDLERQGY
VETIDRDQLHVRPTEPEVVLDQLRSQGRRLQDAADDIEDRWERPHLTEHGMSVVKHQETI
IERARETFADSESLIEAVLTGKQFESLLPALREAKSSGVVVRASVYADPESKAAVEELPY
EDAVTELRWSYIPGPSLAVVDRRHCYFAPNTRAPEQYGIMIDDDILSFIFHWYFYTCNWS
LNERAYVDTDEGWSFVTLEEFIQDFSLLFDEPVDVSIVATGYDNQTHQVETVSGQVIDTF
YQDDFRIEDPPSIDQLASGLTVTIDNDGTPYTIGSWGSVFEDMEAYRIHIDEISLAPPSQ
TRPSRLSDFLIDDPSPE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgacgagttacaggcggccttggagaacgctggcctcaccgcctatcaggcc
gaggcgtatctcactgtcttggatctcggtatgacccctgccgtcaaggtcgcccagaac
tcatcgattccaacgtcacagatttacaagattctccgcgacctcgaacgccaagggtac
gtcgagacgatcgaccgcgatcagctacacgtccggccaactgaacccgaagtcgtgctc
gaccagctacggtcccagggccggcggcttcaggatgcagcggatgatatcgaggatcgg
tgggaacggccccacctcaccgagcacgggatgagcgtcgtcaaacatcaggagacgatc
atcgaacgggccagagaaacgttcgcagacagtgagagcttgatcgaagccgtgctgacc
ggcaaacagttcgagtcgctgctaccggcccttcgagaagccaagtcttcgggtgtcgtc
gtccgcgccagtgtctatgccgatcccgaaagcaaggcagccgtcgaagagctaccttac
gaggatgcggtgacggaactacgttggtcgtacatcccggggccgtctctggctgtcgtc
gaccgtcgccactgctattttgcaccgaacacgcgtgcaccggagcagtacggcatcatg
atcgacgacgacattctttcgtttatcttccactggtacttctatacgtgcaactggtca
ctgaacgaacgggcgtacgtcgacacggacgagggctggtcgtttgtcaccttagaggag
ttcatccaggatttcagtctactgttcgacgaacccgtcgatgtctcgattgtcgccact
ggatacgacaaccagacgcaccaagtcgaaaccgtctctggccaggtcatcgacaccttc
tatcaggacgatttccggatcgaggatccgccttcgatcgatcagcttgcttcggggctt
accgtgaccatcgacaacgatgggacgccgtacacgatcgggagttggggctcagtcttc
gaagatatggaggcctaccggattcatatcgacgagatttcgctcgctccgccatcccag
acccgaccgtccaggctcagtgacttcctcatcgacgatccatcccccgagtga
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