Halorhabdus sp. CBA1104: Hrd1104_07060
Help
Entry
Hrd1104_07060 CDS
T06289
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Hrd1104_07060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hala03400
]
Hrd1104_07060
DNA repair and recombination proteins [BR:
hala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Hrd1104_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_21
IMS_HHH
AAA_28
ALTTAQ_rpt
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QGN07079
UniProt:
A0A650A435
LinkDB
All DBs
Position
1390050..1391804
Genome browser
AA seq
584 aa
AA seq
DB search
MDLEDYWGVGPKTRELLAENLGVEAAIAAIESGDLRTLTEAGLSRGRATRILRRTDGAAM
DVLATRDARDVYKSVLDLAAEFAVTQHAADSIRLLTPKASRTEMEAHLETVIEARDAWTG
LSESDRERVTEAFEAYDSVEGGDLAGVRAALALKAAGMTTGPFETLADLDTEHLEVGAEA
LDALSAGGVAEGADERLDDLRSQRGAVEDMAANPERVIEAVREAGVGGGDAFRETFVRHV
VEEAGVDVEAVRDATPREAANATDFVAEALRTLATDRQDAVTEREQEVSDQLETTLSAAR
EEIDRAVAAVDEIALAVSLARFAIAFDLTAPTYVEDRDVIAVENADNLSLLGAEADVQPI
TYAVGDHTLSVDRARVPPDGDRVAVLTGANSGGKTTLLETLCQVQLLAQMGLPVPAETAE
VGIVDVIVFHRRHASFNAGVLESTLRSVVPPLTDEGRTLMLVDEFEAITEPGSAADLLHG
LVTLTVDRAALGVFVTHLADDLEPLPQTARTDGIFAEGLTTDLELEVDYQPRFETVGRST
PEFIVSRLVADAEDRTERSGFRTLAEAVGEQAVQRTLSDAEWSA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggactactggggcgtcgggccaaagacccgcgagttgctggccgagaac
ctcggcgtcgaggccgccatcgcagcgatcgagagcggtgacctccgaacgctgaccgaa
gccggactgagccgcgggcgggcgacgcggatcctccggcggactgacggggccgcgatg
gacgtactggcgacccgggacgctcgggacgtctacaagtcggtcctggatctggccgcc
gagttcgccgtcacccaacacgcagccgatagcatccgactactgacaccgaaagccagc
cggaccgagatggaagcccacctcgaaaccgtcatcgaggccagagacgcctggacgggg
ctctctgagagcgatcgagaacgcgtcaccgaggctttcgaagcctacgacagcgtcgag
ggcggcgatctggccggcgtccgggccgcgctggcactgaaggcggccggaatgaccacc
ggccccttcgagacgctcgctgatctcgacacagagcacctcgaggtcggggccgaggcc
ctagacgcactgtcggcgggcggggtcgccgagggcgccgacgagcgcctcgacgacctc
cggagccagcgtggggcggtcgaggacatggccgcaaaccccgaacgcgtcatcgaggcc
gtccgcgaggccggcgtcgggggcggtgatgccttccgcgagacgttcgtccgccacgtc
gtcgaggaagccggtgtcgacgtcgaggcggtccgggacgcgacgccccgcgaggccgcc
aacgcgaccgatttcgtcgccgaagcgttgcgaaccctcgccaccgaccgccaggacgcc
gtgaccgagcgagaacaggaagtcagcgaccagctggagacgaccctttcggctgctcgc
gaggagatcgaccgggccgtcgcggccgtcgacgagatcgcactcgccgtctcgctggct
cgcttcgcgatcgcgttcgacctcacggccccgacctacgtcgaggatcgggacgtcatc
gccgtcgagaacgccgacaacctgtcgctactgggagctgaggcggacgtccagccgatc
acctacgccgtcggcgatcacaccctctcggtcgatcgggcacgggtgccgccggacggg
gaccgcgttgccgtcctgacgggagcaaacagcggtgggaagacgacgctgcttgagaca
ctctgtcaagtccagttgctcgcccagatgggcctgcccgtccctgccgagaccgcagaa
gtggggatcgtcgatgtgatcgtcttccaccgccggcacgcgagtttcaacgcgggcgtg
ctcgaatcgacgcttcggtcggtcgtcccgccactgaccgacgaaggccggacgttgatg
ctcgtcgacgagttcgaggcgatcaccgaaccgggtagcgccgccgacctcctgcacggt
ctggtgacgttgaccgtcgatcgggcagcccttggcgtgttcgtcacccacctggccgac
gatctggagccgttaccacagacggcccggaccgacgggatcttcgccgagggactgacg
accgacctcgaactggaagtcgactatcagccccgcttcgagaccgttggccgctcgacg
ccggagttcatcgtctcgcggctcgtcgccgacgccgaggaccggactgaacgctccggg
ttccggaccctcgccgaggcggtcggcgagcaagcggtccagcgcacgctgtcggacgcc
gagtggtccgcctaa
DBGET
integrated database retrieval system
