Halorhabdus sp. CBA1104: Hrd1104_07855
Help
Entry
Hrd1104_07855 CDS
T06289
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala00730
Thiamine metabolism
hala01100
Metabolic pathways
hala01240
Biosynthesis of cofactors
Module
hala_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Hrd1104_07855 (thiC)
Enzymes [BR:
hala01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Hrd1104_07855 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
QGN07224
UniProt:
A0A650A4I6
LinkDB
All DBs
Position
complement(1544036..1545475)
Genome browser
AA seq
479 aa
AA seq
DB search
MTATQLSRARDGEITPAMERVAKRENREPAFVREKVAAGEAVIPNNHEHESLDPMIIGQD
FATKINANIGNSEPESDRETEREKLHTAIQYGADTVMDLSTGGDIPALRAGQIEHSPVPL
GTVPIYEALKQVGSPSDLTASLLLDVIESQAAQGTDYQTIHAGILQEHLSLTDGRITGIV
SRGGSILAEWMEAHGEQNPFYTHFEEICAILAEYDVTISLGDGLRPGSIADANDEAQLAE
LETLGELTERAHAHGVQVMVEGPGHVPLDEIGEHVRHQQAVCDGAPFYLLGPLVTDVAPG
YDHITSAIGATEAARHGAAMLCYVTPKEHLGLPDAQDVRDGLAAYRIAAHAGDVAAGKPG
ARDWDDAISQARYDFDWREQFSLALDPDRAREYHDQTLPEDNYKEARYCSMCGAEFCSMR
IDQDTRDGEEMDGLDADVDLTNSPAAEVNLPPTGTHDTSGLPTVPEVLCNHADSVPGED
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacacaactttcgcgtgcacgcgacggcgagatcactccggcgatggaacgg
gttgccaaacgggagaaccgcgagcccgcattcgttcgcgagaaagtcgccgccggcgag
gcggtgatcccgaacaaccacgaacacgagtctctcgatccgatgatcatcggacaggac
tttgcgacgaagatcaacgccaacatcggcaacagcgaacccgagagcgaccgcgaaacc
gagcgggagaaactgcacactgccatccagtacggtgcggacacggtgatggacctctcg
acggggggtgatattccggcgctccgtgctggccagatcgaacactcaccagtcccgctc
ggaaccgtcccgatctacgaagcgctgaagcaagtgggatctccttcagatctgacggct
tctctcctgttggacgttatcgaatctcaggccgctcagggaaccgactaccagacgatt
cacgcgggcatcctccaggaacacctgtcgctgactgacggccggatcacggggatcgtc
tcgcgaggtgggtcgatcctcgccgagtggatggaagcccacggcgagcagaacccgttt
tatacgcacttcgaggagatctgtgcgatcctcgccgagtacgacgtcacgatcagcctc
ggtgacggcctccggcccggatcgatcgcggatgccaacgacgaggcacaactggcggag
ttagagacgttgggcgaactcaccgaacgcgctcacgcccacggcgtccaagtcatggtc
gaggggccgggccacgtcccgctcgacgagatcggcgagcacgtccgccaccaacaggcc
gtctgtgacggcgcgcccttctacctcctgggtccgctggtgaccgacgttgcgccgggc
tatgaccacatcacaagcgccatcggggcgactgaggctgcccgtcacggcgcggcgatg
ctgtgttacgtcacgcccaaagaacacctcggactcccggatgcccaagacgtccgcgac
ggcctcgccgcgtatcgcatcgccgcccacgcgggtgacgtcgctgccgggaaacccggt
gctcgcgactgggacgatgccatctcacaggcgcgatacgacttcgactggcgcgaacag
ttctccctcgcactcgaccccgaccgcgcccgcgagtaccacgaccagacactcccggaa
gacaactacaaggaggcacggtactgctcgatgtgtggcgctgagttctgttcgatgcga
atcgaccaggatacgagagacggcgaggagatggatggactggacgccgatgtcgacctc
acaaactcgccggctgccgaggtgaacctgccgccgacggggactcacgacaccagtggc
ctgccgacggtgcccgaggtgctgtgtaatcacgccgacagcgtaccgggcgaagactga
DBGET
integrated database retrieval system
