Halorhabdus sp. CBA1104: Hrd1104_07895
Help
Entry
Hrd1104_07895 CDS
T06289
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala03022
Basal transcription factors
hala03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Hrd1104_07895
09124 Replication and repair
03420 Nucleotide excision repair
Hrd1104_07895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hala03021
]
Hrd1104_07895
03036 Chromosome and associated proteins [BR:
hala03036
]
Hrd1104_07895
03400 DNA repair and recombination proteins [BR:
hala03400
]
Hrd1104_07895
Enzymes [BR:
hala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Hrd1104_07895
Transcription machinery [BR:
hala03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Hrd1104_07895
Chromosome and associated proteins [BR:
hala03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Hrd1104_07895
DNA repair and recombination proteins [BR:
hala03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Hrd1104_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
AAA_22
AAA_30
AAA_11
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QGN07232
UniProt:
A0A650A496
LinkDB
All DBs
Position
1550924..1553350
Genome browser
AA seq
808 aa
AA seq
DB search
MSRSGDSGQPDWAQYFGFQAPYDDQAAAIESALQAGQSRGFLAMEGPCGTGKTMAALTAG
ATLIREGDYERLLVVTPVKQQRRQFVEDLRRLNAGLADPLDGLALVGKRDLCPYGREDVF
PPDASVQDRCEDLRENTAGLVESDGQSDDRPVGQAAVSPRLDDIWWDPQVASDLTKAART
GGIGQQAVAGALSTAGGESPYRRTQPTAPDEIGGDDPPLYCPFEADWFARNKGSPIGFEA
GDENVLTAEEYLPNAVERGTCPHRAMGVLVEAADVVIGNYNHLFDPGSRPLIEGILDERT
FVVVDEAHRLEGRVRDLLSDRLGRQTIVQARNDCYQLLSQARQSADHKREVRARLGDHDI
PLAVIDRARDFFDDLLGWLDDRIAEFLDAEVGRDWRTDESVFPEGNLEVPLRDPEEPEPD
ELTRWAEQAGYDGDFWRQLDTVGLAVEETLEALDISRAPVVAAAGMIMRRWWERDHATTF
REIELEHAAQDDQRIDGWRDTYTAGLTLFDCLPAQPLARTFDDVGGGVLMSATLEPLDVF
TRVAGLDALADGDDGREEHDEGRPVLTRSYGLTFPPENRASWIVDATPFTARNRGDPATM
DPLGGEWNATRDEYAHVLRSIARNPGNVLIAMPNYREATWAGAYLDEVVEKAILVDESSS
EEATESLKAEFFAGEGKVLVTSTRGTLTEGVDYDGAKLQAAAVVGVPLVNIGSPRVRAVQ
RAYGDVFGDEQAFEYALTIPAIRRARQAIGRVIRGTDEVGVRALVGARYTPDARHSVYGY
LSPAEREEFVQMSPEFLADQIDRFWTER
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggtctggggattccggccagccggactgggcgcagtacttcggctttcaggcc
ccctacgacgatcaggctgcggcaatcgagtcggcactacaggccggccagtcgcggggc
tttctggcgatggaaggcccgtgcggaactggcaagacgatggccgccctgaccgcgggg
gcgaccctgatccgggagggtgattacgagcggctgctggtcgtcacaccggttaaacag
cagcgtcgccagttcgtcgaggatctccgtcggctgaacgcgggactggccgacccactc
gacggcctcgcactcgtcggcaagcgcgacctctgtccgtacggccgcgaggacgtgttc
ccgccggacgccagcgtccaagatcgctgtgaggacctgcgggagaacacggccgggttg
gtcgaaagcgacggccaaagcgacgacagaccagtcggccaggcagctgtcagccctcgt
ctcgacgatatctggtgggatccacaggttgccagcgatctcacgaaagcggcccggacg
ggcgggatcggccagcaggctgtcgcgggcgcgctctcgacggccgggggggaatcgccg
tatcgccggacccagccgaccgcccccgatgagatcggtggcgacgatccgccgctgtac
tgtcccttcgaggccgactggttcgcccggaacaagggctcgccgatcggtttcgaggcc
ggcgatgagaacgtcctcacggccgaggagtacctcccgaatgcggtcgagcgcgggacc
tgtccccaccgggcgatgggtgtcctggtggaagcggccgacgtcgtgatcggcaactac
aaccacctcttcgatcccggctcacgcccgctgatcgaggggatcctcgacgagcgaacc
ttcgtcgtcgtcgacgaagcccaccgcctggagggacgggtcagggacttgctgtcggat
cgcctcggccgccagaccatcgtccaggcgcgcaacgactgctaccagttgctctcgcag
gcgcgacaaagtgccgaccacaaacgcgaagttcgggcccggctgggggatcacgacatc
ccgttggcagtgatcgatcgggcgcgagatttcttcgacgatctgcttggctggctggac
gaccgcatcgccgaattcctcgacgcggaagtgggccgagactggcggactgacgagagt
gtgttcccggagggcaacctggaagttccgttacgggacccagaggaacccgagcccgac
gaactgacgcggtgggccgagcaggcgggctacgacggggacttctggcgacagctggat
acggtcgggctggccgtcgaagagaccctggaagcgctcgatatctcgcgagcacccgtc
gtcgccgccgcgggcatgatcatgcggcgctggtgggagcgcgatcacgccacgaccttc
cgagagatcgaactcgaacacgcggcccaggacgaccagcgaatcgatggctggcgtgac
acctacaccgccggactgacgctgtttgactgcctgccggcccaaccgctggcccggacg
ttcgacgacgtgggcggtggcgtcctgatgagtgcgaccctggaaccactcgacgtgttc
acccgcgtcgcgggactggacgccctggctgacggtgacgacggccgggaagaacacgac
gagggccgccccgtcctgacccgttcgtacgggctgaccttcccgcccgagaaccgcgca
agctggatcgtcgacgcgacgccctttacggcgcgcaaccgcggcgaccccgcgacgatg
gacccgcttggcggggagtggaacgcgacgcgagacgagtacgcccatgtcctccgatcg
atcgcacgcaatcctggcaacgtcctgatcgcaatgcccaactatcgggaagcaacctgg
gccggcgcgtacctcgatgaggtcgtcgaaaaggcgattctcgtcgatgaatcctcgagt
gaggaagcgaccgaatcgctgaaggctgagttcttcgccggggaggggaaagtcttggtg
acgagtacgcggggcacgctcaccgaaggcgtcgactacgacggggcgaagctgcaggcg
gccgcagtcgtcggggtcccgttagtcaacatcggctcaccgcgggtccgggccgtccag
cgcgcctatggcgacgttttcggcgacgagcaggccttcgagtacgcgttgacgatccct
gccatcaggcgtgcccggcaggcgatcggccgggtgatccgcgggaccgacgaggtcggg
gtgcgagcgctggtcggcgcgcgatatacgcccgacgcacgccactcggtctatggctat
ctgtcgccggccgaacgcgaggaattcgtccagatgagcccggagtttctcgccgaccag
atcgaccggttctggaccgagcggtga
DBGET
integrated database retrieval system
