KEGG   Halorhabdus sp. CBA1104: Hrd1104_07960
Entry
Hrd1104_07960     CDS       T06289                                 
Symbol
polX
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
hala  Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:hala00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hala03400]
    Hrd1104_07960 (polX)
DNA repair and recombination proteins [BR:hala03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    Hrd1104_07960 (polX)
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 HHH_5 PHP HHH DNA_pol_B_palm HHH_2 DNA_pol_lambd_f HHH_3 HopW1-1
Other DBs
NCBI-ProteinID: QGN07241
LinkDB
Position
1564413..1566149
AA seq 578 aa
MSANAAIADRLEEFADRLEAKDVAYKPRAYRRAAENIAAYPGDVATLAEDGTDAVKEVEG
VGDAIAAKVVEYVETGTIEELEDLRKELPVDMDALTSVEGVGPKTVGTLYEAVGIETLDD
LEAAAEAGDIQAVSGFGAKTEQNIHDGIDFARQAHERQLLGEARPQGEAVKEYLETVDAV
QACELAGSLRRWKATIGDVDVLVGSDDAETVLEAFTDWDGADRTIEAGSQKASLRAGGVR
IDLRVVAPPEFGAALQYFTGSKDHNVAVRNRAIERDLKVNEYGVFDVADVEDDDQRAGNR
IAGETEQAMYEALDLPWIPPELRANRGEVEAAAQDALPNLVETEAVRGDFHVHTNWSDGN
NSIEEMVEAAAKRGDEYVAITDHATGPGMVGGVGVADEQLREQRTEIRAIDDDRADITVF
AGVEANIDTDGTVSVADELLADLDLVVASPHAGLDGDGTEQLIAAAKHPHVDIIGHPTGR
YLNRRPGLDVDVERLASVAAAHDTALEVNANPQRLDLGGNAVKQAVEAGATIAVNTDAHR
PANDEYVRFGIHTARRGWAEAEDVLNTWPIEDIRPFLS
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgagtgccaacgcagcgatcgccgaccgcctcgaagagttcgccgaccgcctcgaggcc
aaagacgttgcgtacaaaccccgggcctaccgtcgggccgccgaaaacatcgctgcctac
ccgggcgacgtcgcgacgctcgccgaagacgggacggacgccgtcaaagaagtcgagggc
gtcggcgatgcgatcgccgccaaggtcgtcgagtacgtcgagactgggaccatcgaggaa
ctcgaagaccttcgcaaggagttgcccgtcgatatggacgccctgacgagcgtcgaggga
gtcggtccgaagacggtcgggaccctctacgaggcggtgggcatcgagacgctcgacgat
ctcgaagcagcagccgaggccggcgacatccaggcagtatcgggattcggcgcgaaaact
gaacagaacatccacgacgggatcgacttcgcccgccaggcccacgaacgccagttgctc
ggtgaggcccggccacagggcgaagccgtcaaagagtatctggaaactgtcgatgccgtc
caagcgtgtgaactcgccggatcactgcggcgctggaaagccacgatcggcgacgtcgac
gtgctcgtcggcagcgacgacgccgaaacggtcctcgaggccttcaccgactgggacggg
gccgacaggacgatcgaagccggctcccagaaggcaagtctccgggccggcggcgtccgg
atcgacctccgggtcgtcgcgccccccgaattcggcgctgccctgcagtacttcaccggg
agcaaagatcacaacgtcgcggtccgcaaccgggccatcgaacgcgatctgaaggtaaac
gagtacggcgtcttcgacgtcgccgacgtcgaggacgacgaccagcgggcgggcaaccgg
atcgccggcgagaccgaacaggcgatgtacgaggccctcgatctaccttggattccgccg
gaactccgggcgaaccgcggagaggtcgaagcggcagcccaagacgcgcttccgaacctc
gtcgagactgaggccgtccgtggcgacttccacgtccacacgaactggtcggacggcaac
aattcgatcgaggagatggtcgaggcggccgccaagcgtggcgacgagtacgtcgccatc
accgatcacgcgaccgggccggggatggtcggcggcgtcggcgtcgcggacgagcaactc
cgcgagcaacgcaccgagatacgggcgatcgacgacgaccgcgcggacatcacggtcttt
gccggcgtcgaggcgaacatcgacaccgacgggaccgtttcggtcgccgacgagttgctc
gccgacttggatctcgtggtcgcctcaccccacgctgggctggacggtgacgggaccgaa
cagttgatcgccgctgccaagcacccacacgtcgatatcatcggccatcccaccggccgc
tatctcaaccgccggccgggactggatgtagacgtcgagcgactcgcaagtgtcgccgcc
gcccacgatacagccctggaggtcaacgccaacccccagcggctcgatctgggcgggaac
gccgtcaaacaggccgtagaagctggggcgaccatcgccgtcaacaccgacgcccaccgg
cccgcaaacgacgagtacgtgcgatttggcatccacacggcacggcgtggctgggccgag
gcggaagacgtactcaacacctggccaatcgaagacatccggccgtttctgtcctga

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