Halorhabdus sp. CBA1104: Hrd1104_08750
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Entry
Hrd1104_08750 CDS
T06289
Name
(GenBank) tRNA pseudouridine(54/55) synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_08750
Enzymes [BR:
hala01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Hrd1104_08750
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Hrd1104_08750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QGN07385
UniProt:
A0A650A4V0
LinkDB
All DBs
Position
complement(1713833..1715122)
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AA seq
429 aa
AA seq
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MDVLSYARDALATGPLCDACLGRPVADRSFGLTNAERGRGLRTALALAADDPFEPPEDCW
VCEGVCAGFDEWADRIVDALEPYEFDTYQVGTRVPPLLEENASLLRDDAGLEDDAGEPLK
REVNREVGKRVGARVDAEVGFERPDVQLLVDLDADSVDVQVNSAFVYGRYRKLERDIPQT
EWPCNDCNATGTVDGEPCDGCDGTGYRYDESVEELTAPVVADAMDGREAVFHGAGREDVD
ALMLGAGRPFVIEVKEPRTRAVDVESLQTEINDFADGKVEVEGLEAVTHGMVERVKELDA
SKTYRMDVEFAASVDPVALQNALADLDGATIEQRTPNRVAHRRGDIVRTRDVYDIDGELD
DDTHATIEIHGEGGLYVKELVSGDEGRTEPSLAGLLGVDAEVTALDVLTVEGEDEPFIED
RFLRDAETE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggacgtactttcctacgctcgcgacgcgctggcgacggggccgctgtgtgatgcctgt
ctggggcggccggtcgccgaccggagcttcggtctcaccaacgccgagcgaggccggggc
ctgcggacggcactcgccctcgccgcggacgaccccttcgagccgcccgaagactgctgg
gtctgtgaaggagtctgtgcgggcttcgacgagtgggccgaccgaatcgtcgacgccctc
gaaccgtacgagttcgacacctaccaggtcgggacccgcgttccgccactcctcgaggag
aacgcctcgctgcttcgcgatgacgccggcctcgaggacgacgctggcgaaccgctcaag
cgggaagtcaaccgcgaggtcggcaagcgcgtcggcgctcgcgtcgacgccgaggtgggc
ttcgagcgtcccgacgtccaactgctcgtcgatctcgatgccgacagcgtcgacgtgcaa
gtcaactccgcgttcgtctacggtcgctaccgaaagctcgaacgcgatattccccagact
gagtggccctgcaacgactgcaacgccacgggcacagtcgacggtgagccctgcgatggc
tgtgacggaacgggctatcgctacgacgagagcgtcgaggagctgaccgcgccggtcgtt
gccgacgcgatggacgggcgtgaggcggtcttccacggcgccggccgcgaggacgtcgac
gccctcatgctcggggcgggtcgcccgttcgtgatcgaagtcaaagagccacgaacccgg
gcggtcgacgtcgagtcactccagaccgagatcaacgacttcgccgacggcaaagtcgag
gtcgaggggctggaagcggtcacccacgggatggtcgaacgcgtcaaagaactggacgcg
agcaagacctaccggatggacgtcgagttcgccgcgtcggtcgatccggtggccctccag
aatgccctcgccgacctcgacggggcgacgatcgagcaacgcacgcccaaccgcgtcgct
catcgtcgcggcgacatcgtgcggacgcgtgacgtctacgatatcgacggggaactcgac
gacgatacccacgccacgatcgagatccacggcgaaggcggcctctacgtcaaggaactc
gtctccggtgacgaagggcgaaccgagccgagtctcgccggtctccttggcgtcgacgcc
gaagtcacggcgcttgacgtcctcaccgtcgaaggcgaggacgaaccgttcatcgaagac
cggttcctgcgagacgccgaaacggaatga
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