Halorhabdus sp. CBA1104: Hrd1104_10145
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Entry
Hrd1104_10145 CDS
T06289
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hala03000
]
Hrd1104_10145
Transcription factors [BR:
hala03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hrd1104_10145
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Paralog
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GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
PadR
DUF2250
HTH_IclR
HTH_5
HTH_36
Rrf2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QGN08247
UniProt:
A0A650A840
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Position
complement(1997390..1998466)
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AA seq
358 aa
AA seq
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MNEATLTTILEDAGLSPYQASAYVEILKLGSASATTIAKESDVPDPRIYDVLRDLEEAGY
IETYEQDSLRARAFSPAAILEDLRERATNFETAADEIENLWEAPTIETHTVNFVKRIDTV
LDQAAAIIREASDQVQLAVNLDQFEQLRPTLEAAHENGVHIRIGIYIDEDSDEPFPDLDE
LENVATEVGYRPVPVPFVAVVDRTTTCFAPHKLSMNRYGMIVKDRTYAYIFHWFFLAGIW
ESNLEQLVTDADAPPMTYINVRECIRDIATPLSDGATITATIDAVAVDTEASRSLAGTIV
DVYYTGLEKYPADAPVLYHGGQATIVLDTGEREIEIGGWGAVIEDYEATRIVIESIED
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggcgacactcacgacgatactcgaagacgctgggctctctccgtaccaggcc
agtgcgtacgtcgagattctcaagctcggatcggcgtcggcgacgacaatcgccaaggag
agtgacgttcccgatccgcggatctacgacgtgctgcgagatcttgaggaagctgggtac
atcgagacctacgaacaggacagcctccgggccagagcgttcagtcccgcggccatcttg
gaggatctccgtgagcgggcgaccaacttcgagactgctgccgacgagatcgagaacctg
tgggaagcgccgacaatcgagactcacacggtgaatttcgtcaagcggatcgacacggtt
ctcgatcaagctgcggcgatcatccgcgaagcgagcgaccaggtgcagctggcagtgaac
ctcgaccagttcgagcaactccgccccacgcttgaggcggcccacgagaacggcgttcac
attcggattgggatctatatcgacgaagacagtgacgaaccgtttcccgacctcgacgag
ctggaaaacgtcgcgacggaagtcggttaccggccagtcccggtccccttcgtggcggtc
gtcgatcggacgacgacctgtttcgcgccgcacaaactgtcgatgaatcgatacgggatg
atcgtcaaggatcgaacctacgcctacatcttccactggtttttcctcgccggtatctgg
gagtcgaacttagagcaactcgtgacggacgctgacgccccaccgatgacgtacatcaac
gtccgtgaatgcatccgagacattgccacgcccctctcggacggggccacgattacggcg
acgatcgacgctgttgctgtcgacaccgaggcgtctcgttccctcgccgggacgatcgtc
gacgtctactacaccggactcgagaaatatccggccgacgcgccagtcctgtatcacggc
gggcaggcgaccatcgtcttagacactggagagcgggaaatcgagatcgggggctggggt
gccgtcatcgaagattacgaggcgacccgcatcgtcatcgaatcgatcgaagactga
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