KEGG   Halorhabdus sp. CBA1104: Hrd1104_10680
Entry
Hrd1104_10680     CDS       T06289                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
hala  Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:hala00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hala02048]
    Hrd1104_10680
Enzymes [BR:hala01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Hrd1104_10680
Prokaryotic defense system [BR:hala02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Hrd1104_10680
SSDB
Motif
Pfam: Cas3-like_C_2 ResIII DEAD Cas3_HD
Other DBs
NCBI-ProteinID: QGN07717
UniProt: A0A650A6V8
LinkDB
Position
complement(2107844..2110438)
AA seq 864 aa
MAEPYSHPPEDGREGVALEAHLSDVADRVVHVVPDDATTPTDESLRSVVETLAWVHDFGK
ATTYFQEYLLKDHDADPPMLRHHAPIGSFAAYHALDTQGFDTETCLAGFVAVAKHHGNLP
NVAEYVVDRTHRRDGASRQNSVEKRQTVVLKQIKDIYDNVPDLAKKVFESATGSAEGWES
FVRKYQSGSLLSEIEETVGTETAGRGVDPDTLSSSCYGLVLQCWSALVLADKTSAAGAAN
ESETYAPRQPGFETLSEYIEDLEAGVTADTDGTKTERLNFHRSEARKDVLDNVASFAESG
GGIGTLTLPTGMGKTLTGLSAAFALRDALDGDRVVYALPFTSIIDQVVDEIEEIYETDTA
GRLFTAHHHLAETTIRDIDDQSADDADRNDDIAGMLGESWRAGLTVTTFVQLFESLAGPQ
NRQSMKLPALRDAVVVLDEPQSLPLDWWKLVPRLVDVLTEQYDATVIAMTATQPRLFEDE
FELVDDPDRYFEVVRRVSYALDESTERYIESQSEPKPYAAAANELREVVESGQTTLAVCN
TIDSARELTEQVGDDGFVDVGRLYDDELQNQGTVEDVDPVEIAKNVAATDDNALLHLSTR
LRPADRLTLIETAKALTERGHPTLTISTQLVEAGVDISFDRVFRDLAPIDSIVQAAGRCN
RSFEREQGVVTVWWLDVPDEQSKTPAEAVYNRGTTLLPTVADTLRQIRDESGSLSETDVA
RRGVERYFERLREDKDVGKQTYADWVDDAKAKELGTVSLIDEQLSAEIVVSRTPAERERA
EAIRNAQHNFEFEELRQLLDETKPLRISVPYHSEDSETADAITDLPPLVEDEGIYELDVQ
QNPSHFDRTTGFVVPEASVDHQFL
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggcagaaccgtattcccatccgcccgaggacgggcgtgaaggggtcgcactcgaagcc
catctttccgacgtcgccgaccgcgtggtacacgtcgtccctgacgatgcgaccaccccg
accgacgaatcactgcgatctgtcgtcgaaacgctggcctgggttcacgacttcgggaaa
gcgacgacctacttccaagagtatctcctcaaagaccacgacgctgacccgccgatgctt
cggcatcacgccccgatcgggtcgttcgcggcataccatgccctcgacacgcaggggttc
gacaccgaaacgtgtctggcgggcttcgtcgccgtggcaaaacaccacggcaacctcccg
aacgttgcggagtacgtcgtcgatcgaacacaccgacgagacggcgcttcgagacagaac
agcgtggaaaagcgtcaaacggtggtactcaaacagatcaaggacatctacgacaatgtc
ccggatctcgcaaagaaggtgttcgagagcgcgactggtagtgccgagggctgggaatcg
ttcgtacgaaaatatcagtcggggtcgctactgagtgagatcgaagaaacggtgggaacg
gagacggccggtcgcggcgtcgacccggatacactctcctcgtcgtgctacgggctcgtc
ttgcagtgctggagtgcactcgtactcgcagacaaaaccagtgccgccggtgcagcgaac
gaatcggagacgtacgcacccagacaaccgggattcgagacgctgtccgagtatatcgag
gatctggaggctggcgttacagccgacacggacgggacgaaaaccgagcgcctgaacttc
catcgatcggaagcccggaaagatgtactcgacaacgtggcgtcgttcgccgagagtggt
gggggcattgggacactcacgctcccgacaggaatgggcaagacgctgaccggattgtcg
gccgcattcgcactcagggacgcccttgatggcgatcgcgtggtgtatgcgcttccgttt
acgagcatcatcgatcaggtcgtcgacgagatcgaagagatctatgagaccgacacggca
ggacgactcttcactgcccatcaccatctcgccgagacgacgattcgcgatatcgacgat
cagtccgccgacgatgccgatcggaacgacgacatcgcagggatgctcggtgaaagctgg
cgggcgggcctaactgtcacgacgttcgtccagttgttcgagagtctggccggaccgcaa
aacaggcagtcgatgaaactcccggcactccgggacgccgtcgtcgtcctcgacgagcca
cagagcctcccgctggactggtggaaactcgttccacggctcgtggatgtcctcaccgag
cagtacgacgcgacggtgattgcgatgaccgccacacagccacgactgttcgaggacgaa
ttcgaactcgtggacgacccggaccgatatttcgaagtcgttcgtcgcgtctcctacgct
ctcgacgaatcgaccgagcggtatatcgagtctcagagcgagccgaaaccctacgcagca
gctgccaacgaactccgtgaagtcgtcgaatcgggacaaactacgctcgccgtttgcaac
accatcgacagtgcgcgagaactcacagagcaggtcggcgacgatggctttgtcgatgtt
ggtcgcctttacgacgacgaactacagaaccaggggacagttgaggatgttgatcctgta
gagatcgcgaaaaacgttgcagcgaccgacgacaatgcactccttcacctgtcgactcga
cttcgaccagcagatcgcctcacgttgatcgagacggcgaaagcgctcaccgaacggggc
catccaacgcttacgatctcgacgcaactcgtcgaggccggcgtcgacatcagcttcgat
cgcgtgtttcgcgacctcgctccgatcgacagtatcgttcaggcagccggccggtgtaac
cgttcgttcgagcgcgaacagggagtcgtcactgtctggtggctcgacgtgcccgacgag
cagtcgaagacgccggccgaagccgtctacaatcgcgggacgacgctgcttcccaccgtc
gcagatacgctccgtcagatccgggacgaatccgggtcgctttccgagactgacgtggct
cgaagaggcgtcgagcggtatttcgaacggttacgagaggacaaggatgtcgggaagcaa
acgtacgccgactgggttgacgacgcgaaagcgaaagaactcgggaccgtttcgctcatc
gacgaacagctttcggcagagatcgtcgtcagtcgcacgcctgctgaacgggagcgggcg
gaagcgatacggaacgcccaacacaatttcgaattcgaggaactgcgccagttgctcgac
gagacgaaaccgctgcgtatctcggttccgtatcactccgaagatagcgagaccgccgac
gcgatcacggatcttcccccactcgtcgaggacgaaggcatatacgaactcgacgtacag
caaaatccgtcgcacttcgatcgaacgacgggcttcgtggttcccgaggcgagcgtcgat
caccagttcctatga

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