Halorhabdus sp. CBA1104: Hrd1104_11540
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Entry
Hrd1104_11540 CDS
T06289
Name
(GenBank) DNA-directed DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
hala
Halorhabdus sp. CBA1104
Pathway
hala03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hrd1104_11540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hala03032
]
Hrd1104_11540
Enzymes [BR:
hala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hrd1104_11540
DNA replication proteins [BR:
hala03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
Hrd1104_11540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGN07872
UniProt:
A0A650A615
LinkDB
All DBs
Position
2276771..2278369
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AA seq
532 aa
AA seq
DB search
MPRETPARIVTELASRGYNADREAVTILADAADTDAAIEDALEAVPDTAIKITVEHARQA
VTDSRPAPDSPVVDADSTDGEHPASDQPPSTPSVSPADAESSSVDGSESSPVEMEGVAGA
STRDPIEPAIAGDVTGRSTGTGEYTDFLAVFRDRYERLSRQLRGRVNHRPTNAVESMPGG
SEAAIVGMVADIRSTASGHWLIDLEDTNGTFPALVMKDRDFAALVDELLYDEIIAIEGTL
ADDGGILFADSIHFPDVPRTFEPSTADRPVSAALISDLHVGSQEFDRTAWQEFADWLHEP
EASHVEYLLIGGDMVEGVGVYPDQDEELDIIDIYEQYETFAQHLKDVPGDMEIVMIPGNH
DAVRLAEPQPAFDEELREIMSAHDPTITGNPSTVTIEGVDVLMYHGVSLDEVIAELPEDK
ASYDEPHKAMRQLLKKRHVAPQFGGHTRIAPEERDYMIIEDVPDIFHAGHVHKLGYGTYH
NVLTINSACWQRQTSFQESVNIDPDTGYAPIVHLDSLDESDAGEFLTIRTFG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgcgagacgcccgccagaatcgtcaccgaactcgccagtcgcgggtacaacgcg
gatcgagaagccgtgacgatcttggcggacgcagccgacactgacgccgcgatcgaagac
gcactcgaagccgtccccgatacggcaatcaagatcactgtcgagcacgcccgccaggct
gtcactgactcccgccctgcaccggattctcccgtcgtcgatgccgatagtactgacggt
gaacaccccgcttcggatcagccgccgtcgaccccctccgtttcacctgcagacgccgag
tcatcgtccgtcgacggcagcgagagctctccagtcgaaatggagggggttgctggcgcg
agtactcgggatccgatcgagcccgcaatcgccggcgacgtgaccggtcgctctactggg
acgggagagtacaccgactttctggctgtctttcgggaccgctatgagcgcctgtcccgg
caactccgcgggcgggtcaaccaccggccgaccaacgccgtcgaatccatgccgggcggg
agcgaggctgcgatcgtcggcatggttgcggatatccggtcgacggccagtggccactgg
ctgatcgacctcgaagacaccaacgggacgtttcccgcgctcgtgatgaaagatcgggac
tttgccgccctcgtcgacgaactcctctacgacgagatcatcgccatcgaggggacgttg
gccgacgacggcgggatcctgtttgcagattcgattcacttccccgatgtcccgcggacg
ttcgaaccgtcgacggccgatcgcccggtgagtgcggcactgatcagtgatctgcacgtc
ggcagccaggaattcgaccggaccgcctggcaggagtttgccgattggctccacgaaccc
gaggccagtcacgtcgaatatctgctgatcggcggcgacatggtcgaaggcgtcggcgtc
tatcccgaccaggacgaggaactggacatcatcgacatctacgagcagtacgagaccttc
gcccaacacctcaaagacgtgcccggcgacatggagatcgtgatgatcccgggcaaccac
gacgccgtccgcctggccgaaccccagccagccttcgacgaggaactcagagagatcatg
tcggcccacgacccgacgattacgggcaatccctcgacggtcacgatcgagggcgtcgac
gtcctcatgtatcacggcgtctctctcgatgaggtgattgccgaactgcccgaggacaaa
gccagctacgacgagcctcacaaggcaatgcgccagctgctcaaaaagcgccacgtcgcc
ccgcagttcggtggccacacgcgcattgcgccggaggaacgtgactacatgatcatcgag
gacgttccggatatcttccacgctggacacgtccacaaactcggctacggcacctatcac
aatgtcttgacgatcaacagcgcctgctggcaacgccagaccagcttccaggagagtgtc
aacatcgacccggacactggatacgcgccgatcgtccacctcgattccttagacgagagt
gacgccggcgagttcctgacgatcaggacgttcgggtaa
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