Halorhabdus sp. CBA1104: Hrd1104_12530
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Entry
Hrd1104_12530 CDS
T06289
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hala
Halorhabdus sp. CBA1104
Brite
KEGG Orthology (KO) [BR:
hala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hala03016
]
Hrd1104_12530 (rnz)
Enzymes [BR:
hala01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Hrd1104_12530 (rnz)
Transfer RNA biogenesis [BR:
hala03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Hrd1104_12530 (rnz)
Prokaryotic type
Hrd1104_12530 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QGN08039
LinkDB
All DBs
Position
complement(2514531..2515454)
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AA seq
307 aa
AA seq
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MRVTFLGTSGAVPTTERNPSAIMFSRDGERLLFDCGEGTQRQMMHFGTGFDVAHIFITHL
HGDHVLGIPGLLQTMDFNDREAPLAIHAPQGTRSRLEDLIGATGDRPSYPIRITQNRAGD
VVLDADEYEIRAIETEHRTRSIGYVLEEDDRKGRFDRQKAEEKLGISPGPKYSKLHDGKP
VEHNGRTIQPEEVVGPPRPGRTVVYTGDTRPVEAVRRASEDAELLIHDGTFADDRAERAA
GTGHSTAREAATLAAEAGAKRLALTHVSTRYAGQGHRLETEARDAFGDGAFVAADGQTLD
VPFPDSE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgacgttccttgggaccagcggtgcggtgccgacgaccgaacgtaacccctcg
gcgatcatgttctcccgagacggtgagcgactgctctttgactgtggtgaggggactcag
cgccagatgatgcactttgggacgggattcgacgtcgcacacatcttcatcacccacctc
cacggcgatcacgtcctgggcatcccgggcctcttacagacgatggacttcaacgaccgc
gaggccccgctggcgattcacgcccctcagggcacgcggtcccgactggaggatctcatc
ggagcgaccggcgaccgtccctcctaccccattcggattacgcaaaatcgggcaggggac
gtggtgctagacgccgacgagtacgagattcgagcgatcgagaccgaacatcgcacacgg
tcgatcggctacgtcctcgaagaggacgaccgcaagggccgattcgaccgccagaaagcc
gaggaaaagctcgggatctcaccggggccaaagtactccaaactccacgacggcaagcca
gtcgaacacaacgggcggacgatccagcccgaggaggtcgtcgggccgccccgacccgga
cggaccgtcgtctacacgggcgatacgcggccagtcgaggctgtccggcgagccagcgag
gatgcagagctgttgatccacgacggcacgttcgccgacgatcgcgccgaacgggcggcc
ggaaccgggcactcgacggcgcgcgaggcggcgacgctggccgccgaggctggggcaaag
cggctcgcactcacccacgtctcgacgcggtacgcggggcagggccaccgcctcgaaaca
gaggcccgagacgcattcggtgacggtgctttcgtcgcggcagacggccagacgctcgat
gtcccgttcccggacagcgaatga
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