Halorhabdus sp. CBA1104: Hrd1104_12595
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Entry
Hrd1104_12595 CDS
T06289
Name
(GenBank) PAS domain S-box protein
Organism
hala
Halorhabdus sp. CBA1104
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
Response_reg
PAS_4
GAF_2
PAS_9
PAS
GAF
PAS_8
GAF_3
PAS_10
Autoind_bind
DUF8048
DUF3563
Motif
Other DBs
NCBI-ProteinID:
QGN08052
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Position
2527953..2529638
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AA seq
561 aa
AA seq
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MESRDEIVVLHVDDESAFVETASQLLAREDERLVVETATSAAAALDVLAEIDVDCIVSDY
EMPDCDGIAFLEAVRAEYDDLPFILFTGKGSEEIASDAISAGVTDYLQKGAGTSQYAVLA
NRVTNAVATARSRDRAATMHRMQKVLRDVNQRLVRAESRAQIEADVCTVISRIEPYGLVW
IGAPAGGIVTVRASAGPATDYLDALTVEIDDAAPAVEPTAQALGGATSVVVQSIPDDPAP
ESWEALAREHGLRGVVTVPLVHGGRQFGALSVYSDQPAFFDQREHSLLAELGEDVAHAIH
RAENERELRDKQADLRVYERAVASSSDLLAGIDTDYTLIFANERYREFHGISEDAVGEIP
LPDALGEVWSEQIKAREDRVLDGAILNYEVTRTGPDGDERTFSVRDYPLKDRDGTILGVV
GAMRDITPRKIAERELKRYKQRYDLAVEAAEIGIWDWDIRTDEVQFNEQWATMLGYSIAE
IDNTIDAWEQRVNPEDLPDVAAALDAHLAGETDRYESEHRMRTAGGAWKWVQDIGRVTRR
DEDGDPLRAVGVHIDVDDRVG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcgggacgagatcgtcgtgttgcacgtcgacgacgagtccgcgttcgtcgag
acggccagccagttgctcgcccgtgaggacgagcgcctcgtcgtcgaaaccgcgaccagt
gctgccgcggccctggacgtactggcggagatcgatgtcgattgcatcgtcagcgactac
gagatgcccgactgtgacgggatcgcgttcctcgaagccgttcgtgctgagtacgatgac
ctgccgtttatcctctttacgggcaaagggagcgaggagatcgccagcgatgccatctct
gccggcgtgaccgactatctccagaagggggcaggcacgagccagtacgccgtcctggcc
aatcgggtcacgaacgcggtcgcgaccgcccgcagtcgggaccgggcggcgacgatgcac
cggatgcagaaagtcctccgggacgtcaaccagcgtctcgtccgcgctgaaagtcgggct
cagatcgaagcggacgtgtgtacagttatcagccggatcgagccctacggactggtctgg
attggcgcgcctgcgggcggcatcgtcacggtccgcgcgagtgccggtcccgcaaccgac
tatctggatgcactcactgtcgagatcgatgatgccgctcccgcggtggaaccgactgca
caagctctcggcggagccacgtcggtcgtggtccagtcgatcccggacgatcctgccccg
gagtcctgggaagccctcgcccgcgagcacggcctccgaggtgtcgtcaccgtcccactc
gttcacggcggccggcagttcggggccttgagtgtctacagcgaccagccggcgtttttc
gaccagcgggaacactctctgctggccgaactgggcgaagacgtcgcacacgcgatccat
cgggccgaaaacgagcgggaattgcgagacaaacaggccgacctgcgcgtctacgagcgg
gccgtcgcgtcttcgagtgatctactggccgggatcgacaccgactatacgctcattttc
gccaacgagcgctaccgggaatttcacggcatttccgaggatgccgtcggcgagatcccg
ctgcccgacgccttaggcgaggtctggtccgagcaaatcaaagcacgcgaggatcgcgtt
ctcgatggggcgattctcaactacgaagtgacgcggacgggcccggacggtgacgaacgg
accttttcggtccgcgattatccactgaaagaccgcgacggtacgatcctcggggtcgtc
ggggcgatgcgggacatcaccccgcgaaagatcgccgagcgagaactcaaacgctacaag
caacggtacgatctcgccgtcgaggcggctgaaatcggcatctgggattgggatatccgg
accgacgaggtccaattcaacgagcagtgggcgacgatgcttgggtattcgatagcggag
atcgacaacaccatcgacgcctgggaacagcgtgtcaatccggaagatctccccgacgtc
gcggccgccttggacgctcatctggccggtgagaccgaccgctacgagagtgaacatcgc
atgcgaacggccggcggggcctggaagtgggtccaggacatcggtcgggtgactcgccgc
gacgaggacggcgacccgctccgtgctgtcggggtgcacatcgacgtcgacgatcgcgtc
gggtga
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