Halorhabdus sp. CBA1104: Hrd1104_12995
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Entry
Hrd1104_12995 CDS
T06289
Name
(GenBank) carbohydrate-binding protein
Organism
hala
Halorhabdus sp. CBA1104
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro81C
CBM_6
fn3
CBM_35_2
Ig_DSCAM-DSCAML_C
TAT_signal
Glyco_hydro_81
CBM_35
ASTN1_2_fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
QGN08121
UniProt:
A0A650A705
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Position
2607329..2611066
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AA seq
1245 aa
AA seq
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MSDNTDTPSLDLSRRTFVKGVGAAGAAGATAGTVAAEVNDDDVVSVGSGSFTTAIPAGYD
YPSPPTPEYVTENVSPPIPTNDWWSGLLFGTFSSGPVIGLPYYSDPGENGLTIKHPTAWA
GDPAEQDTIVADWDNTPGLVVGHQRVDEFEDARVNDWGDWHVQTRLGATANMWVDVTQAR
GSPFLFAECIGGPAELTLTDAADEPAQDEQVSVFADQGNVLGVTVEGEHYDQHFGIFAPS
SASWEGLGTATLTSGLGDGTSLTVAVLPEASTDLLSTFEEYAYNHVVGTTIDWEYVQTDD
EGNPVSEVRTTYSFETEAKPESTAEGTLTALFPHQWKYAEEPFADVTYWSPRGEMKVKTG
TSFTTAHTYQGILPFEPTDGTQDMAQLESYVTGLMEDNDRYEWPAPHSAYWVGKDFYRNS
VVAPIAQQTGQTEAQEYFTTAVTDRLEAWLTAGDTSMGTEAGQELFYYDDALGSLFEYPT
DFGSVAAITDHHFHYGYFVYGAAEAARTNPEWASEDNWGGMVNRLIRDYANWERPDHDAA
LDPAGDPKNAFPFLRNFDVYGGHSWAGGTVGNPKGNNQESSSEAVMAYAAMIRWGEMTGD
DALRDAGIFLYTQETASVWDYWFDPEDDSLPDDWGANFDSFGTAGPDFEYASNVWGGGYW
RSLWWAASDPIEVFGINWLPIGGHSFYLGHDTTYANANWQALLDARDRHLDGENPETGFL
GGFEPTAWGYRAMSNPSEAASLVDEALPVGPGGNSSPFIYNFVHFIEGAGLVDTDVVGDV
PFHQVFEDGETRTYVAYNADSAEITASFSDGMELSVPAGEIVVESTAEHYEPDTAAPSTP
SNLEATMTNSYATELAWDGSTDPSGIQYYAVYLDGEEYTTVGAPEVRIDELSRGTDYTIA
VEAVDPFGNASPQATIDVTTDSEDTAPPNAPRNPQTGSPSKTSIDLSWEAASDVGEGSGI
DHYAVLVDGQEYTTTAETSVALDDLDPGTKYTFGVVAVDGAGNESRPVTVDAQTVAEGAT
QRPFQGERRQIPGKIEAEHFDQGGEGVSYHETSDVNQAGADYRDGPVDIGDAGGGNYTIG
YIPEGEWLEYSVTVESTAEYDIIVSVASAEGGGPIHIEVDGEDVTGQIDVPNTGSWTGYT
TVTGAKGVQLAGGDHVVRVVADGGAWNFDWMRFDGGGEETPTETATPTATETATETPESP
QQQSKTEPEPTATTTSGPGFTVVSMILGLFGLSAYLLHNDDDETL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaataccgatacgccgtcgctggatctttcccggcggacgttcgtcaaaggc
gttggtgctgcaggtgctgccggcgcgacagcaggtaccgtagcggccgaagttaacgac
gacgacgtcgtctccgtcggttcagggagcttcacgacagcgatcccggcagggtacgac
tatccgtcccccccgacacccgaatacgtcacggagaacgtgtcgccaccgattccgacc
aacgattggtggagtgggctgctgtttggaacgttcagctccggccctgtcattggcctc
ccctactattccgatcccggcgagaacggcttgactatcaaacacccgacggcgtgggcg
ggcgatccggccgagcaggacacgatcgtcgctgactgggacaacacgcctggactggtc
gtcggtcaccagagagtcgacgaattcgaggatgcacgtgtcaacgactggggcgactgg
cacgtccagacgcgattgggggccaccgcgaatatgtgggtggacgtgacgcaggcgcgg
ggctcgccctttttgttcgccgagtgtattggcggccctgccgaactcacactgacagat
gccgcggacgaaccggcccaagacgagcaggtctcggtgtttgccgaccagggcaacgtg
ctcggcgtgaccgtcgaaggcgaacactacgaccagcactttggcatcttcgccccgtct
tcggcgagctgggagggactcgggacggcgacactcacctctgggctcggtgacggcacc
tccctgacggtcgcagtcctcccggaggcgagcactgatctgctctcgacgttcgaagaa
tacgcgtacaaccacgtcgtcgggacgacgatcgattgggagtacgtccagaccgacgac
gagggcaaccccgtctccgaagtccggacgacctactccttcgagaccgaggccaagccc
gagagtacggctgagggcacgctgacggcgctgtttccccaccagtggaagtacgccgag
gagccattcgccgacgtcacctactggtcgccacggggcgagatgaaggtcaagacgggc
acgtcgttcacgacggcccatacctaccagggaatcctccccttcgagccgacagacggg
acccaggacatggctcagctggaatcgtacgttacgggcctgatggaagataacgatcgg
tacgagtggccagcgccacacagcgcctactgggtcggcaaggacttctatcgtaacagc
gtggtcgcgccgatcgcccaacagaccggccagaccgaagcccaagagtacttcaccacc
gccgtcactgatcggctcgaagcctggttgacggcgggcgatacctcgatggggaccgag
gccggtcaggagctgttctactacgacgacgcgctgggctcgctgttcgaatacccgacc
gactttggctcggtcgcagcgatcaccgaccaccacttccactacgggtacttcgtctac
ggggccgccgaggccgcacgaacgaatcccgagtgggcaagcgaggacaactggggcggc
atggtcaaccgtttgatccgggattacgcaaactgggaacggcccgaccacgacgcggcc
ctcgatcccgccggcgatccgaaaaacgccttcccattcctgcggaacttcgacgtctat
ggtggccactcctgggctggcgggaccgttgggaaccccaagggcaacaaccaggaatcg
tcttccgaggcggtcatggcctacgcggcgatgatccgctggggcgagatgaccggtgac
gacgccctccgggacgccggtatcttcctgtacactcaggagacggcctcggtctgggac
tactggttcgaccccgaagacgactccctacccgacgactggggcgcgaacttcgattcc
tttgggaccgctgggccggacttcgagtacgcctcgaacgtctggggtggtggctattgg
cggtcgctgtggtgggccgcatccgatcctatcgaggtctttggcatcaactggttgccg
atcggcggccactcgttctatctcggccacgacaccacgtacgccaacgcgaactggcag
gcactgctggacgcgcgtgaccgtcacctcgacggcgagaacccggaaaccggattcctg
ggtggcttcgagcctactgcgtggggctatcgggcgatgtcgaacccatcggaagctgcc
tcactcgtcgacgaggcactgccggtcggtccgggcggcaactcctcgccgttcatctac
aacttcgtccacttcatcgagggcgctggcctggtcgatacggatgtcgtcggcgacgtc
cccttccaccaggtcttcgaggacggcgagacgcgaacgtacgtcgcctacaacgccgac
tcggcagagatcactgccagcttctccgacgggatggaactgtccgtccctgccggggag
atcgtcgtcgaatcgaccgccgagcactacgagccggataccgcggccccgtccacgccg
tcgaacctcgaagcgacgatgaccaacagttacgcgaccgaactcgcgtgggacgggtcc
acggacccctccggaatccagtattacgccgtgtatctcgacggcgaggagtacacgacg
gtcggggcccccgaagtccgcatcgacgagctctcgcggggcaccgactacacgatcgcc
gtcgaggcagtcgatccgttcgggaacgcctccccacaggcgacgatcgacgtcacgacc
gatagcgaggacacggcacccccgaacgccccacggaatccccagactggatcgccgtcg
aaaacgtcgatcgatctctcctgggaggcggccagcgacgtcggcgaaggcagcggtatc
gatcactacgccgtcctcgtcgacggccaagagtacacgacgaccgcagagacgagcgtg
gcgctcgacgatctcgatcccgggacgaaatacacgtttggcgtcgtcgcggtcgacgga
gcgggcaacgaatcccggccggtcacggtcgatgcacagactgtcgccgaaggcgcgacc
cagcgccccttccagggggagcgccgccagatccccgggaagatcgaagccgaacacttc
gaccagggcggtgaaggtgtctcctatcacgagacgagcgatgtcaaccaggccggtgcc
gactatcgggacggcccggtcgacatcggcgacgccggtggcggcaactacacgatcggc
tacatcccggaaggcgagtggctcgaatactcggtcactgtcgaatcgaccgccgagtac
gacattatcgtcagcgtcgcctctgccgaaggcggcggcccgattcacattgaggtcgac
ggcgaagacgtcaccggccagatcgacgtgccaaataccggtagctggaccggctatact
acggtgactggagccaaaggcgtccagttagcgggcggcgatcacgtcgtccgtgtcgtc
gccgacggcggtgcctggaacttcgactggatgcgcttcgacggcggtggcgaggagacg
ccgaccgaaactgccacgccgaccgcaaccgagacggcgaccgagacacccgagtcgcca
cagcaacagtccaaaactgagccagaaccgacggcgacgacgaccagtggcccaggcttt
acggtcgtgagcatgatcctcgggctgttcggtctcagtgcgtaccttctgcacaacgac
gacgacgaaacactgtag
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