KEGG   Halorubrum sp. BOL3-1: EKH57_00575
Entry
EKH57_00575       CDS       T05834                                 
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
halb  Halorubrum sp. BOL3-1
Pathway
halb03030  DNA replication
halb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:halb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EKH57_00575
   03410 Base excision repair
    EKH57_00575
   03450 Non-homologous end-joining
    EKH57_00575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halb03032]
    EKH57_00575
   03400 DNA repair and recombination proteins [BR:halb03400]
    EKH57_00575
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:halb04147]
    EKH57_00575
DNA replication proteins [BR:halb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EKH57_00575
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EKH57_00575
DNA repair and recombination proteins [BR:halb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EKH57_00575
Exosome [BR:halb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   EKH57_00575
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: QAU11406
UniProt: A0A410TKT2
LinkDB
Position
complement(1575..2552)
AA seq 325 aa
MGNADLRDLASIRDVPFAEIEGSVVAVDAHNWLYRYLTTTVKWTADEAYTTPDGTEVANL
IGVVQGLPKFFEHDLIPVMVFDGAVTDLKADEVAERREKREAAEERRAAAEERGDAAEAA
RLEARTQRLTDAIQETTRELLRLLDVPIVEAPAEGEAQCAHMAATGTVDHAGSEDYDALL
FGAPTTLRQLTSKGDPELMDLAATLADLDLDRQGLVDVAMLCGTDFNEGVRGIGPKTAVK
AVREHGDLWGVLNARDAEMPNAEAIRELFMDPPAADSGVDADVNPDVEAAREYVVDEWGV
AGEEVERGFERIAESQVQSGLDRWT
NT seq 978 nt   +upstreamnt  +downstreamnt
atgggaaacgccgacctgcgcgatcttgcgtcgatccgagacgttcccttcgcggagatc
gaggggagcgtcgtcgccgtcgacgcgcacaactggctgtaccgctacctcacgaccacg
gtcaagtggacggcggacgaggcgtacacgacccccgacgggaccgaggtcgcaaacctg
atcggggtggttcaggggttaccgaagttcttcgagcacgacctgatcccggtgatggtg
ttcgacggcgccgtcaccgacctgaaggccgacgaggtggccgagcgacgcgagaagcgc
gaggcggccgaggagcgccgggcggccgccgaggagcgcggggacgcggccgaggccgcg
cggctggaggcccgcacgcagcggctcaccgacgcgatccaggagacgactcgggagctg
ctccgcctgctcgacgtgccgatcgtcgaggcgccggcagagggggaagcgcagtgcgcg
cacatggccgcgacggggaccgtcgaccacgccggcagcgaggactacgacgccctgctg
ttcggcgcgcccacgaccctccgccagctgacgagcaagggcgacccggagctaatggac
ctggcggcgacgctcgcggacctcgacctcgaccgacaggggctcgtcgacgtcgcgatg
ctctgcggtacggacttcaacgagggcgtccgggggatcggcccgaagaccgcggtgaag
gcggtcagggaacacggcgacctgtggggcgtcctcaacgcccgcgacgccgagatgccg
aacgccgaggcgatccgcgagctgttcatggacccgcccgcggcggacagcggggtcgac
gcagacgtgaacccggacgtcgaggccgcccgcgagtacgtcgtcgacgagtggggcgtc
gccggagaggaggtcgaacgaggcttcgagcgcatcgcggagtcacaggtccagagcggg
ttggatcggtggacctga

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