Halorubrum sp. BOL3-1: EKH57_02395
Help
Entry
EKH57_02395 CDS
T05834
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EKH57_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halb03019
]
EKH57_02395
03009 Ribosome biogenesis [BR:
halb03009
]
EKH57_02395
04131 Membrane trafficking [BR:
halb04131
]
EKH57_02395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
halb04147
]
EKH57_02395
Messenger RNA biogenesis [BR:
halb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EKH57_02395
Ribosome biogenesis [BR:
halb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EKH57_02395
Membrane trafficking [BR:
halb04131
]
SNARE
SNARE associated proteins
Others
EKH57_02395
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EKH57_02395
Exosome [BR:
halb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKH57_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
IstB_IS21
RNA_helicase
AAA_28
AAA_7
Mg_chelatase
AAA_25
ABC_tran
ATPase
AAA_18
AAA_3
Vps4_C
AAA_17
DUF815
AAA_24
Sigma54_activat
NB-ARC
Parvo_NS1
AAA_11
TsaE
AAA_30
AAA_lid_PRS2_C
SLFN-g3_helicase
Zeta_toxin
NACHT
PhoH
IPT
Zot
Motif
Other DBs
NCBI-ProteinID:
QAU11701
UniProt:
A0A410TLM3
LinkDB
All DBs
Position
complement(339768..341990)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRVDGFTRQNADVGIGERVTIRKAEAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPDGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQSEIQRVREMVELPMKHPQVFSKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLETRGQVVVIGATNRVDSVDPALRRPGRFDREIEIGVPDET
GRKEILQIHTRGMPLSDDVSLDHLADETHGFVGADVESLTKEAAMKALRRYLPEIDLDEE
EVPPSLIDRMIVKRNDFSAALNEVEPSAMREVLVELPKISWDSVGGLENAKQQVQESVEW
PLTSPEKFDRMGVDAPKGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPARGQGAGNNVSERVVNQLLTELDGLEDMGEV
MVIGATNRPDMIDPALLRSGRFDRLVMIGQPDQEGREQILDIHTQDTPLAPDVSLREVAE
ITDGYVGSDIEGIAREAAIEALRDDDDAEEVEMKHFRAALESVRPTINEEILSYYEEIEQ
QFQGGKGETLRDAGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactcgaagtggcgaaggcgtacccgaacgactcgggacgcggtatc
gcccgactcgaccccgacacgctgttgcacctgaagctctcgcccggcgacatcatcgag
atcgagggcgcggagaccaccgccgcgaaggtctggcgcgcggaccgccaggactggaac
accgacacggtgcgcgtcgacgggttcacccgccagaacgcagacgtcggcatcggcgag
cgcgtcaccatccggaaagccgaggcggagaaggccgacaagctcgtcttggctcccccc
gaggaggcgtcggttcagttcggctccgacgccgccggcatggtgaaacggcagatcctc
aagcgccccgtcgtcgagcgcgacatcgtcccggtgatgtcgtcgacgaaccacccgttc
atgcggtcgcccggccaagcgatcccgctgatcgcggtcgagacggagcccgacggcgtc
tgtctcatcaccgaggacacggaggtcgaactccgcgaggagccgatctccggcttcgag
aagaccggtggcgggatcacctacgaggacatcggcggtctccagtccgagatccagcgc
gtccgtgagatggtcgagctaccgatgaaacacccgcaggtgttctcgaagctcgggatc
gagccgccgcagggcgtcctgctccacggcccgccgggcaccgggaagacgctcttggcg
aaggcggtcgccaacgagacctcggcgtcgttcttctcgatcgccggtcccgagatcatc
tcgaagtactacggcgagtccgaacagcagctcagagagatcttcgaggacgccaaagag
gagagtccgagcatcatcttcatcgacgaactcgactcgatcgcgccgaaacgcgaggac
gtcaccggcgaggtcgagcgccgcgtcgtcgcccagctgctcacgatgatggacggcctc
gaaacgcgcgggcaggtcgtcgtcatcggcgcgacgaaccgcgtcgatagcgtcgacccc
gcgctccgccggccgggacggttcgaccgcgagatcgagatcggcgtccccgacgagacg
gggcgcaaagagatactccagatccacacccgcgggatgccgctctcggacgacgtgagc
ctcgaccacctcgcagacgagacccacggcttcgtcggcgccgacgtcgagagcctcacc
aaggaggccgcgatgaaggcgctgcgccggtacctcccggagatcgacttagacgaggag
gaggtaccgccgagcctcatcgaccggatgatcgtcaagcgcaacgacttctccgcggcg
ttaaacgaggtggagccgtcggcgatgcgcgaggtgctcgtcgagctgccgaagatctcg
tgggacagcgtcggcgggctggaaaacgcgaaacagcaggtacaagagtccgtcgagtgg
ccgctcacctcgccggagaagttcgaccggatgggcgtcgacgcgccgaagggcgtgctg
ctgtacgggccgccgggcaccgggaagacgctgatggcgaaggcggtcgccaacgagacg
aacgcgaacttcatctcggtccggggaccgcaactcctctcgaagtgggtcggcgagtcg
gagaaggcgatcagacagaccttccggaaggcccgacaggtgagtccgacggtcatcttc
ttcgacgaactcgacagcctcgctcccgcacgcggccaaggcgccgggaacaacgtctcg
gagcgcgtcgtcaaccagctcctcaccgagctcgacggactcgaggacatgggcgaggtg
atggtgatcggcgcgaccaaccggccggacatgatcgaccccgcgctgctgcgctcgggt
cggttcgaccgcctcgtgatgatcggccagcccgatcaagagggccgcgagcagatcctc
gacatccacacccaggacacgccgctggctcccgacgtgagcctccgtgaggtggccgag
ataaccgacggctacgtcggatccgacatcgaagggatcgcccgcgaagccgccatcgag
gcgctgcgcgacgacgacgacgccgaggaggtggaaatgaaacacttccgggccgcgttg
gagtcggttcgcccgacgatcaacgaggagatcctctcgtactacgaggagatcgaacag
cagttccagggcggcaagggagagacgctccgggacgccggcggccggatcgggttccag
tga
DBGET
integrated database retrieval system
