Halorubrum sp. BOL3-1: EKH57_02515
Help
Entry
EKH57_02515 CDS
T05834
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EKH57_02515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halb03021
]
EKH57_02515
Transcription machinery [BR:
halb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EKH57_02515
Prokaryotic type
Archaeal type
TFB
EKH57_02515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Ribosomal_S27e
Zn_ribbon_3
Sigma70_r4
DUF8106
DUF5817
Zn_Ribbon_YjdM
Trm112p
Cas12f1-like_TNB
FtrD-like
Cyclin_C
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QAU11724
LinkDB
All DBs
Position
364716..365669
Genome browser
AA seq
317 aa
AA seq
DB search
MERPSRQRQREQDTEQETDESTVACPECDSENIVTDADQELVCEDCGLVLDERNIDRGPE
WRAFNHSERQSKSRVGAPITETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVSTA
ALYAACRQEGIPRSLDEVADVSRVPQKEIGRTYRYISQELGLELRPVDPKQFVPRFGSAL
ELSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGFR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtccgagtcgccagcgccaacgagagcaggacacggagcaggaaacggacgaa
tcgacggttgcctgtccggagtgtgactcggagaacatcgttaccgacgccgaccaggag
ttggtctgtgaggactgcggcctcgtcttagacgagcggaacatcgaccgcgggccggag
tggcgggcgttcaatcactcggagcggcagtcgaagtcgcgcgtcggcgccccgatcacg
gagacgatgcacgacaaggggctgacgacgacgatcgactggaaggacaaggacgcgtac
gggcggtcgctctcctcggagaagcgctcccagatgcaccgcctgcgcaagtggcaggag
cgcatccggaccaaggacgcgggcgagcgcaaccttcagttcgcgctctcggagatcgac
cgcatggccagcgcgctcggcgtaccgcggtcggtacgcgaagtagcgtccgtcatttat
cgacgggcgttgaacgaggacctcatccgcgggcgctcgatcgagggcgtctccaccgct
gcgctgtacgccgcctgccgacaggaggggatccctcgcagcctcgacgaggtcgcggac
gtctcccgggtcccgcaaaaagagatcggtcggacgtatcggtacatctcccaggagttg
gggttggagctgaggccggtcgaccccaagcagttcgtcccccgcttcgggtccgcgctc
gaactgagcgaggaggtccagtcgaaggcgaccgagatcatcgacgtctccgccgaacag
ggactgctctccggaaaatcaccgaccggcttcgcggccgccgccatctacgcggcctcg
ctgctctgtaatgagaagaagacccagcgcgaggtcgcggatgtcgcgcaggtcaccgag
gtcaccatccggaaccgatatcaagaacagatcgaagcgatgggcttcaggtag
DBGET
integrated database retrieval system
