Halorubrum sp. BOL3-1: EKH57_02605
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Entry
EKH57_02605 CDS
T05834
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
halb
Halorubrum sp. BOL3-1
Pathway
halb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKH57_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halb03400
]
EKH57_02605
Enzymes [BR:
halb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EKH57_02605
DNA repair and recombination proteins [BR:
halb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EKH57_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
QAU11739
UniProt:
A0A410TLP6
LinkDB
All DBs
Position
complement(388416..389342)
Genome browser
AA seq
308 aa
AA seq
DB search
MERGAIDVDDLAGSFDLQATLESGQSYLWNRADGEMYDELHAHGGDAWYETVVDPIPGLT
DERVAVRVRQEGGVHDGTLRWEASADAEPLLTYLLRLDDDLDAIYDATSDLPLLERAYDA
YEGMRLTRDPAFPCLISFICSAQMRVARVHGMQRRLRETYGDAVALGDETYSAFPTPEQL
AARTEDELRDLSLGYRAPYVQRTAEMVASGEADPREALDLPYEDARESLTRFVGVGDKVA
DCVLLFSLGFLGAVPLDTWIRTTVEEYYPDCDRGSYAATSRAIRERFGGGFAGYAQTYVF
YYLRAGGE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcggggcgatcgacgtcgacgacttggccggatcgttcgatcttcaggcgacc
ctcgagagcgggcagagctacctctggaaccgcgcggacggcgagatgtacgacgaactt
cacgcccacgggggcgacgcgtggtacgagaccgttgtcgacccgattcccgggctgacg
gacgagcgcgtcgcggtccgggttcgccaggagggcggcgtccacgacggaacgcttcgt
tgggaggcgtcggccgacgccgagccgctgttgacatacctgctccggctcgacgacgac
ctcgacgcaatctacgacgccacgtcggatctccccctcttggagcgcgcgtacgacgcc
tacgaggggatgcggctgacccgcgatccggcgtttccctgcctgatatcatttatctgc
tcggcacagatgcgcgtcgcccgcgtccacgggatgcagcggcggcttcgggagacgtac
ggcgacgcggtcgcgctcggtgacgagacgtacagtgcgttcccgacgcccgagcagttg
gccgcgcgaacggaagacgaactccgcgacctctctttaggctaccgcgcgccgtacgtc
cagcgcaccgccgagatggtcgcgagcggggaagccgacccgcgagaggcgctcgactta
ccgtacgaggacgcccgcgagtcgctcacgcggttcgtcggcgttggcgacaaggtcgca
gactgcgtgttgctgttctcgctcgggttcctcggagcggtaccgttggacacctggatc
cgcaccaccgtcgaggagtactaccccgactgcgaccgcgggagctacgcggcgacgtcc
cgggcgatccgcgagcggttcggcggcgggttcgccggctacgcgcagacgtacgtgttc
tactacctccgcgccggcggcgagtga
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